PDB entry 5abo

View 5abo on RCSB PDB site
Description: CRYSTAL STRUCTURE ANALYSIS OF FUNGAL VERSATILE PEROXIDASE FROM PLEUROTUS ERYNGII. MUTANT VPi-br. MUTATED RESIDUES T2K, D69S, T70D, S86E, A131K, D146T, Q202L, Q219K, H232E, Q239R, L288R, S301K, A308R, A309K AND A314R.
Class: oxidoreductase
Keywords: class II (fungal) peroxidases, protoporphyrin ix, electron transfer, lignin peroxidase, lignin degradation, manganese peroxidase, mn-independent oxidation phenolic non-phenolic aromatics, mnii oxidation, peroxidase, polyvalent peroxidase, oxidoreductase, heme, hydrogen peroxide, iron, manganese, metal-binding, secreted, zymogen
Deposited on 2015-08-07, released 2015-11-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-11-04, with a file datestamp of 2015-10-30.
Experiment type: XRAY
Resolution: 1.1 Å
R-factor: N/A
AEROSPACI score: 0.73 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: versatile peroxidase vpl2
    Species: Pleurotus eryngii [TaxId:5323]
    Database cross-references and differences (RAF-indexed):
    • Uniprot O94753 (2-End)
      • expression tag (0-1)
      • engineered mutation (68-69)
      • engineered mutation (85)
      • engineered mutation (130)
      • engineered mutation (145)
      • engineered mutation (201)
      • engineered mutation (218)
      • engineered mutation (231)
      • engineered mutation (238)
      • engineered mutation (287)
      • engineered mutation (300)
      • engineered mutation (307-308)
      • engineered mutation (313)
    Domains in SCOPe 2.06: d5aboa1, d5aboa2
  • Heterogens: CA, HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5aboA (A:)
akcddgrttanaaccilfpilddiqenlfdgaqcgeevheslrltfhdaigfsptlgggg
adgsiiafsdietnfpanagideiveaqkpfvakhnisagdfiqfagavgvsncpggvri
pfflgrpdavkaspdhlvpepfdsvtsilarmgdagfspvevvwllashsiaaadkvdps
ipgtpfdstpgvfdsqffietllkgrlfpgtadnkgeaksplqgeirlqsdellardprt
acewqsmvnnqpkiqnrfaatmskmallgqdktklidcsdviptpparvgaahlpagfsl
kdveqacrktpfprltadpgpvtsvppvpgs

    Sequence, based on observed residues (ATOM records): (download) 
    >5aboA (A:)
akcddgrttanaaccilfpilddiqenlfdgaqcgeevheslrltfhdaigfsptlgggg
adgsiiafsdietnfpanagideiveaqkpfvakhnisagdfiqfagavgvsncpggvri
pfflgrpdavkaspdhlvpepfdsvtsilarmgdagfspvevvwllashsiaaadkvdps
ipgtpfdstpgvfdsqffietllkgrlfpgtadnkgeaksplqgeirlqsdellardprt
acewqsmvnnqpkiqnrfaatmskmallgqdktklidcsdviptpparvgaahlpagfsl
kdveqacrktpfprl