PDB entry 5a5f

View 5a5f on RCSB PDB site
Description: crystal structure of murd ligase from escherichia coli in complex with uma and ADP
Class: ligase
Keywords: ligase, peptidoglycan synthesis, ADP-forming enzyme, cell wall, cell shape, cell cycle, nucleotide-binding, ATP- binding, cell division, ligand, conformation
Deposited on 2015-06-17, released 2016-04-13
The last revision prior to the SCOPe 2.08 freeze date was dated 2018-02-28, with a file datestamp of 2018-02-23.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: N/A
AEROSPACI score: 0.34 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: udp-n-acetylmuramoylalanine--d-glutamate ligase
    Species: Escherichia coli K-12 [TaxId:83333]
    Database cross-references and differences (RAF-indexed):
    • Uniprot P14900 (0-436)
      • expression tag (437)
    Domains in SCOPe 2.08: d5a5fa1, d5a5fa2, d5a5fa3, d5a5fa4
  • Heterogens: UMA, ADP, MLI, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >5a5fA (A:)
adyqgknvviiglgltglscvdfflargvtprvmdtrmtppgldklpeaverhtgslnde
wlmaadlivaspgialahpslsaaadagieivgdielfcreaqapivaitgsngkstvtt
lvgemakaagvnvgvggniglpalmllddecelyvlelssfqlettsslqavaatilnvt
edhmdrypfglqqyraaklriyenakvcvvnaddaltmpirgadercvsfgvnmgdyhln
hqqgetwlrvkgekvlnvkemklsgqhnytnalaalaladaaglprasslkalttftglp
hrfevvlehngvrwindskatnvgsteaalnglhvdgtlhlllggdgksadfsplaryln
gdnvrlycfgrdgaqlaalrpevaeqtetmeqamrllaprvqpgdmvllspacasldqfk
nfeqrgnefarlakelgs

    Sequence, based on observed residues (ATOM records): (download) 
    >5a5fA (A:)
adyqgknvviiglgltglscvdfflargvtprvmdtrmtppgldklpeaverhtgslnde
wlmaadlivaspgialahpslsaaadagieivgdielfcreaqapivaitgsngkstvtt
lvgemakaagvnvgvggniglpalmllddecelyvlelssfqlettsslqavaatilnvt
edhmdrypfglqqyraaklriyenakvcvvnaddaltmpircvsfgvnmgdyhlnhqqge
twlrvkgekvlnvkemklsgqhnytnalaalaladaaglprasslkalttftglphrfev
vlehngvrwindskatnvgsteaalnglhvdgtlhlllggdgksadfsplarylngdnvr
lycfgrdgaqlaalrpevaeqtetmeqamrllaprvqpgdmvllspacasldqfknfeqr
gnefarlakelgs