PDB entry 4z86

View 4z86 on RCSB PDB site
Description: Crystal structure of Peptidyl-tRNA hydrolase mutant -N118D from Vibrio cholerae at 1.63A resolution.
Class: hydrolase
Keywords: Peptidyl tRNA hydrolase, N118D mutant Vibrio cholerae Hydrolase, HYDROLASE
Deposited on 2015-04-08, released 2016-06-08
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-04-05, with a file datestamp of 2017-03-31.
Experiment type: XRAY
Resolution: 1.63 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidyl-tRNA hydrolase
    Species: Vibrio cholerae [TaxId:243277]
    Gene: pth, VC_2184
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KQ21 (4-198)
      • expression tag (3)
      • engineered mutation (119)
    Domains in SCOPe 2.08: d4z86a1, d4z86a2
  • Chain 'B':
    Compound: Peptidyl-tRNA hydrolase
    Species: Vibrio cholerae [TaxId:243277]
    Gene: pth, VC_2184
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KQ21 (4-198)
      • expression tag (3)
      • engineered mutation (119)
    Domains in SCOPe 2.08: d4z86b1, d4z86b2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4z86A (A:)
    gamvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllin
    sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghd
    glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrclei
    lmkdgltkaqnrlhtfkae
    

    Sequence, based on observed residues (ATOM records): (download)
    >4z86A (A:)
    vsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllinsqe
    lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghdglk
    dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrcleilmk
    dgltkaqnrlhtfkae
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4z86B (B:)
    gamvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllin
    sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghd
    glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrclei
    lmkdgltkaqnrlhtfkae
    

    Sequence, based on observed residues (ATOM records): (download)
    >4z86B (B:)
    vsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllinsqe
    lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghdglk
    dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrcleilmk
    dgltkaqnrlhtfkae