PDB entry 4z86
View 4z86 on RCSB PDB site
Description: Crystal structure of Peptidyl-tRNA hydrolase mutant -N118D from Vibrio cholerae at 1.63A resolution.
Class: hydrolase
Keywords: Peptidyl tRNA hydrolase, N118D mutant Vibrio cholerae Hydrolase, HYDROLASE
Deposited on
2015-04-08, released
2016-06-08
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-04-05, with a file datestamp of
2017-03-31.
Experiment type: XRAY
Resolution: 1.63 Å
R-factor: N/A
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peptidyl-tRNA hydrolase
Species: Vibrio cholerae [TaxId:243277]
Gene: pth, VC_2184
Database cross-references and differences (RAF-indexed):
- Uniprot Q9KQ21 (4-198)
- expression tag (3)
- engineered mutation (119)
Domains in SCOPe 2.08: d4z86a1, d4z86a2 - Chain 'B':
Compound: Peptidyl-tRNA hydrolase
Species: Vibrio cholerae [TaxId:243277]
Gene: pth, VC_2184
Database cross-references and differences (RAF-indexed):
- Uniprot Q9KQ21 (4-198)
- expression tag (3)
- engineered mutation (119)
Domains in SCOPe 2.08: d4z86b1, d4z86b2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4z86A (A:)
gamvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghd
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrclei
lmkdgltkaqnrlhtfkae
Sequence, based on observed residues (ATOM records): (download)
>4z86A (A:)
vsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllinsqe
lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghdglk
dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrcleilmk
dgltkaqnrlhtfkae
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4z86B (B:)
gamvsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghd
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrclei
lmkdgltkaqnrlhtfkae
Sequence, based on observed residues (ATOM records): (download)
>4z86B (B:)
vsqpikllvglanpgpeyaktrhnagawvveelarihnvtlknepkffgltgrllinsqe
lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghdglk
dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqexldaavdesvrcleilmk
dgltkaqnrlhtfkae