PDB entry 4yxl

View 4yxl on RCSB PDB site
Description: Crystal structure of Syrian hamster prion protein complexed with POM1 FAB
Class: immune system
Keywords: prion, antibody, Immune system complex, IMMUNE SYSTEM
Deposited on 2015-03-23, released 2015-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-10-14, with a file datestamp of 2015-10-09.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: major prion protein
    Species: Mesocricetus auratus [TaxId:10036]
    Gene: PRNP, PRP
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: POM1 Fab Heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4YXL (0-217)
    Domains in SCOPe 2.08: d4yxlh1, d4yxlh2
  • Chain 'L':
    Compound: POM1 Fab Light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4YXL (0-212)
    Domains in SCOPe 2.08: d4yxll1, d4yxll2
  • Heterogens: NA, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'H':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4yxlH (H:)
qvqlqqsgtelvmpgasvkmsckasgytftdywmhwvkqrpgqglewigsidpsdsytsh
nekfkgkatltvdessstaymqlssltsedsavyfcsrsgygyyameywgqgtsvtvssa
ktappsvyplapgggatnsmvtlgclvkgyfpepvtvtwnsgslsggvhtfpavlqsdly
tlsssvtvpsstwpsetvtcnvahpasstkvdkkivpr

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4yxlL (L:)
divltqspailsvspgervsfscrasqnigtsihwyqqrtnesprliikyasesisgips
rfsgsgsgtdftlsinsvesediadyycqqsntwpytfgggtklelkradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnsetdqdskdstysmsstlt
ltkdeyerhntytceathktstspivksfnrne