PDB entry 4ywe

View 4ywe on RCSB PDB site
Description: Crystal Structure of a Putative Aldehyde Dehydrogenase from Burkholderia cenocepacia
Class: oxidoreductase
Keywords: SSGCID, Oxidoreductase, Structural Genomics, Seattle Structural Genomics Center for Infectious Disease
Deposited on 2015-03-20, released 2015-04-08
The last revision prior to the SCOPe 2.05 freeze date was dated 2015-04-08, with a file datestamp of 2015-04-03.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4ywea_
  • Chain 'B':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4yweb_
  • Chain 'C':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4ywec_
  • Chain 'D':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4ywed_
  • Chain 'E':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4ywee_
  • Chain 'F':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4ywef_
  • Chain 'G':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4yweg_
  • Chain 'H':
    Compound: Putative aldehyde dehydrogenase
    Species: Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610) [TaxId:216591]
    Gene: BCAL2623
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4yweh_
  • Heterogens: EDO, MG, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4yweA (A:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweA (A:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4yweB (B:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweB (B:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4yweC (C:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweC (C:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4yweD (D:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweD (D:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4yweE (E:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweE (E:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4yweF (F:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweF (F:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4yweG (G:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweG (G:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygagggvelpfggvghsghgrekgfealygftalktiairhg
    

  • Chain 'H':
    Sequence, based on SEQRES records: (download)
    >4yweH (H:)
    mahhhhhhmeeakhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaard
    afagpwgaasaaergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfef
    yagaadklhgetlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvv
    kpaedaclsvlrvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgk
    lvtqmaaenhvpvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlier
    avyeplverlatafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqv
    vadapesgfyqapallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvag
    iwtrdgarqmrlarrlragqvfinnygagggvelpfggvghsghgrekgfealygftalk
    tiairhg
    

    Sequence, based on observed residues (ATOM records): (download)
    >4yweH (H:)
    akhfiagewtlpaqletipvvdpsdgqpfatiargtapdieravaaardafagpwgaasa
    aergrvlmrlsarvtdsieelaaieardtgkplkqaradaaalaryfefyagaadklhge
    tlpyqagytvltvrephgvtghivpwnypmqifgrsvgaalaagnacvvkpaedaclsvl
    rvaelaaeaglpagalnivtgygheagaalarhpgidhisftgspatgklvtqmaaenhv
    pvtlelggkspqivfadadldaalpvlvsaivqnggqtcsagsrvlieravyeplverla
    tafnglrvgpsradldcgplinakqqqrvwdflsdaqhdgipmaahgqvvadapesgfyq
    apallrdvppshrlaqeevfgpvlaamrfvdedeavalangtpyglvagiwtrdgarqmr
    larrlragqvfinnygggvelpfggvghsghgrekgfealygftalktiairhg