PDB entry 4ywb

View 4ywb on RCSB PDB site
Description: Structure of rat cytosolic pepck in complex with 3-mercaptopicolinic acid and oxalic acid
Class: lyase
Keywords: kinase, gluconeogenesis, lyase
Deposited on 2015-03-20, released 2015-09-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-12-04, with a file datestamp of 2019-11-29.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ywba1, d4ywba2
  • Chain 'C':
    Compound: Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
    Species: Rattus norvegicus [TaxId:10116]
    Gene: PCK1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4ywbc1, d4ywbc2
  • Heterogens: MN, NA, OXD, 1WD, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ywbA (A:)
mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
qeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmsee
dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
espegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhdpf
amrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewm
fgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqv
nadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >4ywbA (A:)
pqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqe
egvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedf
ekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvle
algdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllg
kkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpg
wkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvae
tsdggvywegideplapgvtitswknkewrpepcahpnsrfctpasqcpiidpawespeg
vpiegiifggrrpagvplvyealswqhgvfvgaamrseatagkvimhdpfamrpffgynf
gkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsa
kltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeier
elralkqrisqm

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4ywbC (C:)
mppqlhngldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahm
qeegvirklkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmsee
dfekafnarfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsv
lealgdgefikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsl
lgkkcfalriasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptl
pgwkvecvgddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnv
aetsdggvywegideplapgvtitswknkewrpqdeepcahpnsrfctpasqcpiidpaw
espegvpiegiifggrrpagvplvyealswqhgvfvgaamrseataaaehkgkvimhdpf
amrpffgynfgkylahwlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewm
fgriegedsakltpigyvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqv
nadlpyeierelralkqrisqm

    Sequence, based on observed residues (ATOM records): (download) 
    >4ywbC (C:)
ldfsakviqgsldslpqevrkfvegnaqlcqpeyihicdgseeeygrllahmqeegvirk
lkkydncwlaltdprdvariesktviitqeqrdtvpipksgqsqlgrwmseedfekafna
rfpgcmkgrtmyvipfsmgplgsplakigieltdspyvvasmrimtrmgtsvlealgdge
fikclhsvgcplplkkplvnnwacnpeltliahlpdrreiisfgsgyggnsllgkkcfal
riasrlakeegwlaehmlilgitnpegkkkylaaafpsacgktnlammnptlpgwkvecv
gddiawmkfdaqgnlrainpengffgvapgtsvktnpnaiktiqkntiftnvaetsdggv
ywegideplapgvtitswknkewrpdeepcahpnsrfctpasqcpiidpawespegvpie
giifggrrpagvplvyealswqhgvfvgaamrseatkvimhdpfamrpffgynfgkylah
wlsmahrpaaklpkifhvnwfrkdkngkflwpgfgensrvlewmfgriegedsakltpig
yvpkedalnlkglgdvnveelfgiskefwekeveeidkyledqvnadlpyeierelralk
qrisqm