PDB entry 4ym0
View 4ym0 on RCSB PDB site
Description: Crystal structure of the human galectin-4 C-terminal carbohydrate recognition domain in complex with lacto-N-tetraose (LNT)
Class: sugar binding protein
Keywords: galectin, lectin, carbohydrate binding protein, lacto-N-tetraose, carbohydrate recognition, beta sandwich, SUGAR BINDING PROTEIN
Deposited on
2015-03-06, released
2015-07-01
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-09-09, with a file datestamp of
2015-09-04.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ym0a_ - Chain 'B':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ym0b_ - Chain 'C':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ym0c_ - Chain 'D':
Compound: Galectin-4
Species: Homo sapiens [TaxId:9606]
Gene: LGALS4
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4ym0d_ - Heterogens: LAT, NAG, GAL, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4ym0A (A:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ym0A (A:)
ptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgngt
vvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsafq
rvdtleiqgdvtlsyvqi
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4ym0B (B:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ym0B (B:)
pptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgng
tvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsaf
qrvdtleiqgdvtlsyvqi
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4ym0C (C:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ym0C (C:)
gpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgn
gtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsa
fqrvdtleiqgdvtlsyvqi
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4ym0D (D:)
hchqqlnslptmegpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgss
gdialhinprmgngtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyan
gqhlfdfahrlsafqrvdtleiqgdvtlsyvqi
Sequence, based on observed residues (ATOM records): (download)
>4ym0D (D:)
gpptfnppvpyfgrlqggltarrtiiikgyvpptgksfainfkvgssgdialhinprmgn
gtvvrnsllngswgseekkithnpfgpgqffdlsircgldrfkvyangqhlfdfahrlsa
fqrvdtleiqgdvtlsyvqi