PDB entry 4yfz

View 4yfz on RCSB PDB site
Description: Structural basis of glycan recognition in neonate-specific rotaviruses
Class: viral protein
Keywords: rotavirus, structural biology, glycan, VIRAL PROTEIN
Deposited on 2015-02-25, released 2015-09-30
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-10-14, with a file datestamp of 2015-10-09.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Outer capsid protein VP4
    Species: Human rotavirus A [TaxId:10941]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4yfza_
  • Heterogens: GAL, NAG, BGC, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4yfzA (A:)
gsaldgpytpdssnlpsnywylinplndgvvfsvtnnstfwmftylilpntaqtnvtvnv
mnetvnisidnsgstyrfvdyfktsstqsyrqrnylitehrlqayrrdesgnisnywgss
tygdlrvgtyfnpvlnavinlnadfyiipdsqqekcteyikggl

    Sequence, based on observed residues (ATOM records): (download) 
    >4yfzA (A:)
aldgpytpdssnlpsnywylinplndgvvfsvtnnstfwmftylilpntaqtnvtvnvmn
etvnisidnsgstyrfvdyfktsstqsyrqrnylitehrlqayrrdesgnisnywgssty
gdlrvgtyfnpvlnavinlnadfyiipdsqqekcteyikggl