PDB entry 4y2z

View 4y2z on RCSB PDB site
Description: Crystal structure of Peptidyl-tRNA hydrolase mutant -H24N from Vibrio cholerae
Class: hydrolase
Keywords: H24N mutant, Peptidyl t-RNA hydrolase. Vibrio cholerae, HYDROLASE
Deposited on 2015-02-10, released 2016-03-09
Made obsolete by 5b6j on 2017-04-12

The last revision prior to the SCOPe 2.06 freeze date was dated 2016-03-09, with a file datestamp of 2016-03-04.
Experiment type: XRAY
Resolution: 2.43 Å
R-factor: N/A
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peptidyl-tRNA hydrolase
    Species: Vibrio cholerae [TaxId:243277]
    Gene: pth, VC_2184
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KQ21 (Start-198)
      • insertion (3)
      • engineered mutation (25)
    Domains in SCOPe 2.06: d4y2za_
  • Chain 'B':
    Compound: Peptidyl-tRNA hydrolase
    Species: Vibrio cholerae [TaxId:243277]
    Gene: pth, VC_2184
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9KQ21 (Start-198)
      • insertion (3)
      • engineered mutation (25)
    Domains in SCOPe 2.06: d4y2zb_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4y2zA (A:)
gamvsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghn
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrclei
lmkdgltkaqnrlhtfkae

    Sequence, based on observed residues (ATOM records): (download) 
    >4y2zA (A:)
vsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllinsqe
lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghnglk
dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrcleilmk
dgltkaqnrlhtfkae

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4y2zB (B:)
gamvsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllin
sqelrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghn
glkdtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrclei
lmkdgltkaqnrlhtfkae

    Sequence, based on observed residues (ATOM records): (download) 
    >4y2zB (B:)
vsqpikllvglanpgpeyaktrnnagawvveelarihnvtlknepkffgltgrllinsqe
lrvlipttfmnlsgkaiaalanfyqikpeeimvahdeldlppgvakfkqggghgghnglk
dtisklgnnkefyrlrlgighpghkdkvagyvlgkapakeqecldaavdesvrcleilmk
dgltkaqnrlhtfkae