PDB entry 4x7d
View 4x7d on RCSB PDB site
Description: Crystal structure of 2012 NSW GII.4 P domain in complex with Nano-85
Class: viral protein
Keywords: Nanobody, VHH domain, Norovirus, Protruding domain, viral protein
Deposited on
2014-12-09, released
2014-12-31
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-03-04, with a file datestamp of
2015-02-27.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: vp1
Species: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU [TaxId:1241973]
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: vp1
Species: Norovirus Hu/GII.4/Sydney/NSW0514/2012/AU [TaxId:1241973]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Nano-85 Nanobody
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4x7dc_ - Chain 'D':
Compound: Nano-85 Nanobody
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4x7dd1, d4x7dd2 - Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4x7dC (C:)
dvqlvesggglvqpggslrlscaasgsifsiyamgwyrqapgkqrelvasissgggtnya
dsvkgrftisgdnakntvylqmnslkpedtavyyckredysayappsgsrgrgtqvtvss
hhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4x7dC (C:)
dvqlvesggglvlscaasgsifsiyamgwyrqqrelvasissgggtnyadsvkgrftisg
dnakntvylqmnslkpedtavyyckredysayappsgsrgrgtqv
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4x7dD (D:)
dvqlvesggglvqpggslrlscaasgsifsiyamgwyrqapgkqrelvasissgggtnya
dsvkgrftisgdnakntvylqmnslkpedtavyyckredysayappsgsrgrgtqvtvss
hhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4x7dD (D:)
dvqlvesggglvqpggslrlscaasgsifsiyamgwyrqapgkqrelvasissgggtnya
dsvkgrftisgdnakntvylqmnslkpedtavyyckredysayappsgsrgrgtqvtvss
h