PDB entry 4wq4
View 4wq4 on RCSB PDB site
Description: E. coli YgjD(E12A)-YeaZ heterodimer in complex with ATP
Class: transferase
Keywords: heterodimer, YgjD-YeaZ, Glu12Ala, t6A, transferase
Deposited on
2014-10-21, released
2015-01-28
The last revision prior to the SCOPe 2.08 freeze date was dated
2015-08-26, with a file datestamp of
2015-08-21.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: N/A
AEROSPACI score: 0.23
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: tRNA N6-adenosine threonylcarbamoyltransferase
Species: Escherichia coli [TaxId:83333]
Gene: tsaD, gcp, ygjD, b3064, JW3036
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: tRNA N6-adenosine threonylcarbamoyltransferase
Species: Escherichia coli [TaxId:83333]
Gene: tsaD, gcp, ygjD, b3064, JW3036
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: tRNA threonylcarbamoyladenosine biosynthesis protein tsab
Species: Escherichia coli [TaxId:83333]
Gene: tsaB, yeaZ, b1807, JW1796
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4wq4c1, d4wq4c2 - Chain 'D':
Compound: tRNA threonylcarbamoyladenosine biosynthesis protein tsab
Species: Escherichia coli [TaxId:83333]
Gene: tsaB, yeaZ, b1807, JW1796
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4wq4d1, d4wq4d2 - Heterogens: FE, ATP, ACT, GOL, PEG, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4wq4C (C:)
mrilaidtateacsvalwndgtvnahfelcprehtqrilpmvqdilttsgtsltdinala
ygrgpgsftgvrigigiaqglalgaelpmigvstlmtmaqgawrkngatrvlaaidarmg
evywaeyqrdengiwhgeeteavlkpeivhermqqlsgewvtvgtgwqawpdlgkesglv
lrdgevllpaaedmlpiacqmfaegktvavehaepvylrnnvawkklpgkehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4wq4C (C:)
mrilaidtateacsvalwndgtvnahfelcprehtqrilpmvqdilttsgtsltdinala
ygrgpgsftgvrigigiaqglalgaelpmigvstlmtmaqgawrkngatrvlaaidarmg
evywaeyqrdengiwhgeeteavlkpeivhermqqlsgewvtvgtgwqawpdlgkesglv
lrdgevllpaaedmlpiacqmfaegktvavehaepvylrnnvawkklpg
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4wq4D (D:)
mrilaidtateacsvalwndgtvnahfelcprehtqrilpmvqdilttsgtsltdinala
ygrgpgsftgvrigigiaqglalgaelpmigvstlmtmaqgawrkngatrvlaaidarmg
evywaeyqrdengiwhgeeteavlkpeivhermqqlsgewvtvgtgwqawpdlgkesglv
lrdgevllpaaedmlpiacqmfaegktvavehaepvylrnnvawkklpgkehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4wq4D (D:)
mrilaidtateacsvalwndgtvnahfelcprehtqrilpmvqdilttsgtsltdinala
ygrgpgsftgvrigigiaqglalgaelpmigvstlmtmaqgawrkngatrvlaaidarmg
evywaeyqrdengiwhgeeteavlkpeivhermqqlsgewvtvgtgwqawpdlgkesglv
lrdgevllpaaedmlpiacqmfaegktvavehaepvylrnnvawkklpg