PDB entry 4uo6

View 4uo6 on RCSB PDB site
Description: Structure of the A_Canine_Colorado_17864_06 H3 haemagglutinin in complex with Sialyl Lewis X
Class: viral protein
Keywords: viral protein, equine, canine
Deposited on 2014-05-31, released 2014-07-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-08-13, with a file datestamp of 2014-08-08.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.19001
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: h3 haemagglutinin ha1 chain
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4uo6a_
  • Chain 'B':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/CANINE/COLORADO/17864/2006(H3N8)) [TaxId:867285]
    Database cross-references and differences (RAF-indexed):
    • Uniprot E0UVR5 (0-171)
      • expression tag (172-174)
      • conflict (130)
    Domains in SCOPe 2.05: d4uo6b_
  • Heterogens: NAG, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4uo6A (A:)
qnpisgnntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildg
rnctlidamlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveft
aegftwtgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwg
ihhpssnqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgd
ilminsngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvt
ygkcpkyirqntlklatgmrnvpekqtr

    Sequence, based on observed residues (ATOM records): (download) 
    >4uo6A (A:)
nntatlclghhavangtlvktmsddqievtnatelvqsismgkicnksyrildgrnctli
damlgdphcdafqyeswdlfiersnafsncypydipdyaslrsivassgtveftaegftw
tgvtqngrsgackrgsadsffsrlnwltksgssyptlnvtmpnnknfdklyiwgihhpss
nqeqtklyiqesgrvtvstkrsqqtiipnigsrplvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfklntgkssvmrsdvpidicvsecitpngsisndkpfqnvnkvtygkcpk
yirqntlklatgmrnvpek

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4uo6B (B:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgdgcfkiyhkcdnaciesirtgtydhyiyrdealnnrfqsgr