PDB entry 4unz

View 4unz on RCSB PDB site
Description: Structure of the A_Equine_Newmarket_2_93 H3 haemagglutinin in complex with 6SO4-Sialyl Lewis X
Class: viral protein
Keywords: viral protein, influenza
Deposited on 2014-05-31, released 2014-07-23
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-08-13, with a file datestamp of 2014-08-08.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.20088
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hay subunit of haemagglutinin
    Species: INFLUENZA A VIRUS (A/EQ/NEWMARKET/93/(H3N8)) [TaxId:159470]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4unza_
  • Chain 'B':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/EQ/NEWMARKET/93/(H3N8)) [TaxId:159470]
    Database cross-references and differences (RAF-indexed):
    • PDB 4UNZ (0-172)
    Domains in SCOPe 2.05: d4unzb_
  • Chain 'C':
    Compound: hay subunit of haemagglutinin
    Species: INFLUENZA A VIRUS (A/EQ/NEWMARKET/93/(H3N8)) [TaxId:159470]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q82847 (2-329)
      • expression tag (0-1)
    Domains in SCOPe 2.05: d4unzc_
  • Chain 'D':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/EQ/NEWMARKET/93/(H3N8)) [TaxId:159470]
    Database cross-references and differences (RAF-indexed):
    • PDB 4UNZ (0-End)
    Domains in SCOPe 2.05: d4unzd_
  • Chain 'E':
    Compound: hay subunit of haemagglutinin
    Species: INFLUENZA A VIRUS (A/EQ/NEWMARKET/93/(H3N8)) [TaxId:159470]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d4unze_
  • Chain 'F':
    Compound: h3 haemagglutinin ha2 chain
    Species: INFLUENZA A VIRUS (A/EQ/NEWMARKET/93/(H3N8)) [TaxId:159470]
    Database cross-references and differences (RAF-indexed):
    • PDB 4UNZ (0-End)
    Domains in SCOPe 2.05: d4unzf_
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4unzA (A:)
pdqnptsgnntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvl
dgrnctlidamlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtle
ftaegftwtgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyi
wgihhpssnkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkp
gdilminsngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnk
itygkcpkyirqntlklatgmrnvpekqir

    Sequence, based on observed residues (ATOM records): (download) 
    >4unzA (A:)
ntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvldgrnctlid
amlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtleftaegftwt
gvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyiwgihhpssn
keqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkpgdilminsn
gnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnkitygkcpky
irqntlklatgmrnvpe

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4unzB (B:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfqi

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4unzC (C:)
pdqnptsgnntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvl
dgrnctlidamlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtle
ftaegftwtgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyi
wgihhpssnkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkp
gdilminsngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnk
itygkcpkyirqntlklatgmrnvpekqir

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4unzD (D:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfqi

    Sequence, based on observed residues (ATOM records): (download) 
    >4unzD (D:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfq

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4unzE (E:)
pdqnptsgnntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvl
dgrnctlidamlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtle
ftaegftwtgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyi
wgihhpssnkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkp
gdilminsngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnk
itygkcpkyirqntlklatgmrnvpekqir

    Sequence, based on observed residues (ATOM records): (download) 
    >4unzE (E:)
nntatlclghhavangtlvktitddqievtnatelvqsisigkicnnsyrvldgrnctli
damlgdphcddfqyenwdlfierssafsncypydipdyaslrsivassgtleftaegftw
tgvtqnggsgackrgsadsffsrlnwltksgnsypilnvtmpnnknfdklyiwgihhpss
nkeqtklyiqesgrvtvstersqqtvipnigsrpwvrgqsgrisiywtivkpgdilmins
ngnlvaprgyfklrtgkssvmrsdalidtcvsecitpngsipndkpfqnvnkitygkcpk
yirqntlklatgmrnvpe

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4unzF (F:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfqi

    Sequence, based on observed residues (ATOM records): (download) 
    >4unzF (F:)
gifgaiagfiengwegmvdgwygfryqnsegtgqaadlkstqaaidqingklnrviertn
ekfhqiekefsevegriqdlekyvedtkidlwsynaellvalenqhtidltdaemnklfe
ktrrqlrenaedmgggcfkiyhkcdnacigsirngtydhyiyrdealnnrfq