PDB entry 4s3o

View 4s3o on RCSB PDB site
Description: PCGF5-RING1B-UbcH5c complex
Class: Ligase/Transcription
Keywords: E2, E3, RING domain, Ubiquitin RING E3 Ligase, Ligase-Transcription complex
Deposited on 2015-03-23, released 2015-07-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-07-22, with a file datestamp of 2015-07-17.
Experiment type: XRAY
Resolution: 2 Å
R-factor: N/A
AEROSPACI score: 0.31 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Ubiquitin-conjugating enzyme E2 D3
  Species: Homo sapiens [TaxId:9606]
  Gene: UBE2D3, UBC5C, UBCH5C
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61077 (2-147)
    • expression tag (0-1)
  Domains in SCOPe 2.06: d4s3oa1, d4s3oa2
• Chain 'B':
  Compound: E3 ubiquitin-protein ligase RING2
  Species: Homo sapiens [TaxId:9606]
  Gene: RNF2, BAP1, DING, HIPI3, RING1B
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q99496 (Start-117)
• Chain 'C':
  Compound: Polycomb group RING finger protein 5
  Species: Homo sapiens [TaxId:9606]
  Gene: PCGF5, RNF159
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q86SE9
• Chain 'D':
  Compound: Ubiquitin-conjugating enzyme E2 D3
  Species: Homo sapiens [TaxId:9606]
  Gene: UBE2D3, UBC5C, UBCH5C
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61077 (2-147)
    • expression tag (0-1)
  Domains in SCOPe 2.06: d4s3od1, d4s3od2
• Chain 'E':
  Compound: E3 ubiquitin-protein ligase RING2
  Species: Homo sapiens [TaxId:9606]
  Gene: RNF2, BAP1, DING, HIPI3, RING1B
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q99496 (Start-117)
• Chain 'F':
  Compound: Polycomb group RING finger protein 5
  Species: Homo sapiens [TaxId:9606]
  Gene: PCGF5, RNF159
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q86SE9
• Heterogens: ZN, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >4s3oA (A:)
  gsalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltihfptd
  ypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcdpnpddpl
  vpeiariyktdrdkynrisrewtqkyam
  

  
  
• Chain 'B':
  No sequence available.
  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >4s3oD (D:)
  gsalkrinkelsdlardppaqcsagpvgddmfhwqatimgpndspyqggvffltihfptd
  ypfkppkvafttriyhpninsngsicldilrsqwspaltiskvllsicsllcdpnpddpl
  vpeiariyktdrdkynrisrewtqkyam
  

  
  
• Chain 'E':
  No sequence available.
  
  
• Chain 'F':
  No sequence available.