SCOPe 2.08: Structural Classification of Proteins

PDB entry 4rlq

View 4rlq on RCSB PDB site
Description: Crystal structure of a benzoate coenzyme A ligase with o-Toluic acid
Class: ligase
Keywords: Substrate Specificity, Kinetics, LIGASE
Deposited on 2014-10-17, released 2015-09-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-11-11, with a file datestamp of 2015-11-06.
Experiment type: XRAY
Resolution: 1.63 Å
R-factor: N/A
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

Chain 'A':
Compound: benzoate-coenzyme a ligase
Species: Rhodopseudomonas palustris [TaxId:1076]
Gene: badA
Database cross-references and differences (RAF-indexed):
- Uniprot Q93TK0 (0-517)
  - conflict (77)
  - conflict (335)
Domains in SCOPe 2.08: d4rlqa_
Chain 'B':
Compound: benzoate-coenzyme a ligase
Species: Rhodopseudomonas palustris [TaxId:1076]
Gene: badA
Database cross-references and differences (RAF-indexed):
- Uniprot Q93TK0 (0-517)
  - conflict (77)
  - conflict (335)
  - expression tag (518)
Domains in SCOPe 2.08: d4rlqb1, d4rlqb2
Heterogens: 3SK, GOL, HOH

PDB Chain Sequences:

Chain 'A':
Sequence, based on SEQRES records: (download)

>4rlqA (A:)
vtpppekfnfaehllqtnrvrpdktafvddisslsfaqleaqtrqlaaalraigvkreer
vlllmldgtdwpvaflgaiyagivpvavntlltaddyaymlehsraqavlvsgalhpvlk
aaltksdhevqrvivsrpaaplepgevdfaefvgahaplekpaatqaddpafwlyssgst
grpkgvvhthanpywtselygrntlhlreddvcfsaaklffayglgnaltfpmtvgattl
lmgerptpdavfkrwlggvggvkptvfygaptgyagmlaapnlpsrdqvalrlassagea
lpaeigqrfqrhfgldivdgigstemlhiflsnlpdrvrygttgwpvpgyqielrgdggg
pvadgepgdlyihgpssatmywgnraksrdtfqggwtksgdkyvrnddgsytyagrtddm
lkvsgiyvspfeieatlvqhpgvleaavvgvadehgltkpkayvvprpgqtlsetelktf
ikdrlapykyprstvfvaelpktatgkiqrfklregvlg

Sequence, based on observed residues (ATOM records): (download)

>4rlqA (A:)
vtpppekfnfaehllqtnrvrpdktafvddisslsfaqleaqtrqlaaalraigvkreer
vlllmldgtdwpvaflgaiyagivpvavntlltaddyaymlehsraqavlvsgalhpvlk
aaltksdhevqrvivsrpaaplepgevdfaefvgahaplekpaatqaddpafwlyssgst
grpkgvvhthanpywtselygrntlhlreddvcfsaaklffayglgnaltfpmtvgattl
lmgerptpdavfkrwlggvggvkptvfygaptgyagmlaapnlpsrdqvalrlassagea
lpaeigqrfqrhfgldivdgigstemlhiflsnlpdrvrygttgwpvpgyqielrgdggg
pvadgepgdlyihgpssatmywgnraksrdtfqggwtksgdkyvrnddgsytyagrtddm
lkvsgiyvspfeieatlvqhpgvleaavvgvadehgltkpkayvvprpgqtlsetelktf
ikdrlapykyprstvfvaelpktatgkiqrfklregvl

Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)

>4rlqB (B:)
vtpppekfnfaehllqtnrvrpdktafvddisslsfaqleaqtrqlaaalraigvkreer
vlllmldgtdwpvaflgaiyagivpvavntlltaddyaymlehsraqavlvsgalhpvlk
aaltksdhevqrvivsrpaaplepgevdfaefvgahaplekpaatqaddpafwlyssgst
grpkgvvhthanpywtselygrntlhlreddvcfsaaklffayglgnaltfpmtvgattl
lmgerptpdavfkrwlggvggvkptvfygaptgyagmlaapnlpsrdqvalrlassagea
lpaeigqrfqrhfgldivdgigstemlhiflsnlpdrvrygttgwpvpgyqielrgdggg
pvadgepgdlyihgpssatmywgnraksrdtfqggwtksgdkyvrnddgsytyagrtddm
lkvsgiyvspfeieatlvqhpgvleaavvgvadehgltkpkayvvprpgqtlsetelktf
ikdrlapykyprstvfvaelpktatgkiqrfklregvlg