PDB entry 4rkf

View 4rkf on RCSB PDB site
Description: Drosophila melanogaster Rab3 bound to GMPPNP
Class: Hydrolase
Keywords: GTP hydrolysis, hydrolase
Deposited on 2014-10-13, released 2014-12-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2015-02-04, with a file datestamp of 2015-01-30.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.159
AEROSPACI score: 0.58 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ras-related protein Rab-3
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Rab3, CG7576
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25228
      • engineered mutation (81)
    Domains in SCOPe 2.08: d4rkfa_
  • Chain 'B':
    Compound: Ras-related protein Rab-3
    Species: Drosophila melanogaster [TaxId:7227]
    Gene: Rab3, CG7576
    Database cross-references and differences (RAF-indexed):
    • Uniprot P25228
      • engineered mutation (81)
    Domains in SCOPe 2.08: d4rkfb_
  • Heterogens: GNP, MG, 1PE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4rkfA (A:)
gamasggdpkwqkdaadqnfdymfklliignssvgktsflfryaddsftsafvstvgidf
kvktvfrhdkrvklqiwdtagleryrtittayyrgamgfilmydvtnedsfnsvqdwvtq
iktyswdnaqvilvgnkcdmedqrvisfergrqladqlgveffetsakenvnvkavferl
vdiicdkmse

    Sequence, based on observed residues (ATOM records): (download) 
    >4rkfA (A:)
qnfdymfklliignssvgktsflfryaddsftsafvstvgidfkvktvfrhdkrvklqiw
dtagleryrtittayyrgamgfilmydvtnedsfnsvqdwvtqiktyswdnaqvilvgnk
cdmedqrvisfergrqladqlgveffetsakenvnvkavferlvdiicdkm

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4rkfB (B:)
gamasggdpkwqkdaadqnfdymfklliignssvgktsflfryaddsftsafvstvgidf
kvktvfrhdkrvklqiwdtagleryrtittayyrgamgfilmydvtnedsfnsvqdwvtq
iktyswdnaqvilvgnkcdmedqrvisfergrqladqlgveffetsakenvnvkavferl
vdiicdkmse

    Sequence, based on observed residues (ATOM records): (download) 
    >4rkfB (B:)
qnfdymfklliignssvgktsflfryaddsftsafvstvgidfkvktvfrhdkrvklqiw
dtagleryrtittayyrgamgfilmydvtnedsfnsvqdwvtqiktyswdnaqvilvgnk
cdmedqrvisfergrqladqlgveffetsakenvnvkavferlvdiicdkms