PDB entry 4rgm
View 4rgm on RCSB PDB site
Description: Structure of Staphylococcal Enterotoxin B bound to the neutralizing antibody 20B1
Class: toxin/immune system
Keywords: Neutralizing antibody, Staphylococcal enterotoxin B, TOXIN-IMMUNE SYSTEM complex
Deposited on
2014-09-30, released
2015-01-21
The last revision prior to the SCOPe 2.06 freeze date was dated
2015-04-01, with a file datestamp of
2015-03-27.
Experiment type: XRAY
Resolution: 2.69 Å
R-factor: N/A
AEROSPACI score: 0.18
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: enterotoxin type b
Species: Staphylococcus aureus [TaxId:1280]
Gene: entB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4rgma1, d4rgma2 - Chain 'B':
Compound: 20B1 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4rgmb1, d4rgmb2 - Chain 'C':
Compound: 20B1 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: 20B1 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: 20B1 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4rgml1, d4rgml2 - Chain 'S':
Compound: enterotoxin type b
Species: Staphylococcus aureus [TaxId:1280]
Gene: entB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4rgms1, d4rgms2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4rgmA (A:)
gsefgsesqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysik
dtklgnydnvrvefknkdladkykdkyvdvfganyyyqcyfskktndinshqtdkrktcm
yggvtehngnqldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkkl
yefnnspyetgyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievyl
ttkkk
Sequence, based on observed residues (ATOM records): (download)
>4rgmA (A:)
sqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgny
dnvrvefknkdladkykdkyvdvfganyyyqcyfsrktcmyggvtehngnqldkyrsitv
rvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnnspyetgyikfienen
sfwydmmpapgdkfdqskylmmyndnkmvdskdvkievylttk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4rgmB (B:)
diqmtqspsslsaslgervsltcrasqeisdyltwlqqkpdgtikrliyvassldsgvpk
rfsgsrsgsdysltisslesedfadyyclqyanypwtfgggtkleirradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4rgmB (B:)
diqmtqspsslsaslgervsltcrasqeisdyltwlqqkpdgtikrliyvassldsgvpk
rfsgsrsgsdysltisslesedfadyyclqyanypwtfgggtkleirradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne
- Chain 'C':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4rgmL (L:)
diqmtqspsslsaslgervsltcrasqeisdyltwlqqkpdgtikrliyvassldsgvpk
rfsgsrsgsdysltisslesedfadyyclqyanypwtfgggtkleirradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>4rgmL (L:)
diqmtqspsslsaslgervsltcrasqeisdyltwlqqkpdgtikrliyvassldsgvpk
rfsgsrsgsdysltisslesedfadyyclqyanypwtfgggtkleirradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne
- Chain 'S':
Sequence, based on SEQRES records: (download)
>4rgmS (S:)
gsefgsesqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysik
dtklgnydnvrvefknkdladkykdkyvdvfganyyyqcyfskktndinshqtdkrktcm
yggvtehngnqldkyrsitvrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkkl
yefnnspyetgyikfienensfwydmmpapgdkfdqskylmmyndnkmvdskdvkievyl
ttkkk
Sequence, based on observed residues (ATOM records): (download)
>4rgmS (S:)
sqpdpkpdelhksskftglmenmkvlyddnhvsainvksidqflyfdliysikdtklgny
dnvrvefknkdladkykdkyvdvfganyyyqcyfskrktcmyggvtehngnqldkyrsit
vrvfedgknllsfdvqtnkkkvtaqeldyltrhylvknkklyefnnspyetgyikfiene
nsfwydmmpapgdkfdqskylmmyndnkmvdskdvkievylttk