PDB entry 4qai

View 4qai on RCSB PDB site
Description: P. stipitis OYE2.6-Y78W
Class: oxidoreductase
Keywords: TIM barrel, flavin oxidoreductase, alkene reductase, OXIDOREDUCTASE
Deposited on 2014-05-05, released 2014-09-10
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-09-10, with a file datestamp of 2014-09-05.
Experiment type: XRAY
Resolution: 2.75 Å
R-factor: 0.224
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: NADPH dehydrogenase
    Species: Scheffersomyces stipitis [TaxId:322104]
    Gene: OYE 2.6, OYE2.6, PICST_44614
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3LT82
      • engineered mutation (77)
      • conflict (168)
    Domains in SCOPe 2.08: d4qaia_
  • Chain 'B':
    Compound: NADPH dehydrogenase
    Species: Scheffersomyces stipitis [TaxId:322104]
    Gene: OYE 2.6, OYE2.6, PICST_44614
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3LT82
      • engineered mutation (77)
      • conflict (168)
    Domains in SCOPe 2.08: d4qaib_
  • Chain 'C':
    Compound: NADPH dehydrogenase
    Species: Scheffersomyces stipitis [TaxId:322104]
    Gene: OYE 2.6, OYE2.6, PICST_44614
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3LT82
      • engineered mutation (77)
      • conflict (168)
    Domains in SCOPe 2.08: d4qaic_
  • Chain 'D':
    Compound: NADPH dehydrogenase
    Species: Scheffersomyces stipitis [TaxId:322104]
    Gene: OYE 2.6, OYE2.6, PICST_44614
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3LT82
      • engineered mutation (77)
      • conflict (168)
    Domains in SCOPe 2.08: d4qaid_
  • Chain 'E':
    Compound: NADPH dehydrogenase
    Species: Scheffersomyces stipitis [TaxId:322104]
    Gene: OYE 2.6, OYE2.6, PICST_44614
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3LT82
      • engineered mutation (77)
      • conflict (168)
    Domains in SCOPe 2.08: d4qaie_
  • Chain 'F':
    Compound: NADPH dehydrogenase
    Species: Scheffersomyces stipitis [TaxId:322104]
    Gene: OYE 2.6, OYE2.6, PICST_44614
    Database cross-references and differences (RAF-indexed):
    • Uniprot A3LT82
      • engineered mutation (77)
      • conflict (168)
    Domains in SCOPe 2.08: d4qaif_
  • Heterogens: FMN, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4qaiA (A:)
    mssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfp
    gtlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvad
    pavmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamda
    gfdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigir
    ispwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseed
    qagdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklr
    dgidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaieal
    

    Sequence, based on observed residues (ATOM records): (download)
    >4qaiA (A:)
    ssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfpg
    tlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvadp
    avmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamdag
    fdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigiri
    spwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseedq
    agdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklrd
    gidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaie
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4qaiB (B:)
    mssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfp
    gtlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvad
    pavmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamda
    gfdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigir
    ispwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseed
    qagdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklr
    dgidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaieal
    

    Sequence, based on observed residues (ATOM records): (download)
    >4qaiB (B:)
    ssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfpg
    tlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvadp
    avmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamdag
    fdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigiri
    spwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseedq
    agdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklrd
    gidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaie
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4qaiC (C:)
    mssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfp
    gtlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvad
    pavmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamda
    gfdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigir
    ispwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseed
    qagdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklr
    dgidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaieal
    

    Sequence, based on observed residues (ATOM records): (download)
    >4qaiC (C:)
    ssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfpg
    tlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvadp
    avmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamdag
    fdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigiri
    spwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseedq
    agdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklrd
    gidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaie
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4qaiD (D:)
    mssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfp
    gtlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvad
    pavmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamda
    gfdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigir
    ispwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseed
    qagdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklr
    dgidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaieal
    

    Sequence, based on observed residues (ATOM records): (download)
    >4qaiD (D:)
    ssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfpg
    tlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvadp
    avmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamdag
    fdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigiri
    spwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseedq
    agdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklrd
    gidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaie
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4qaiE (E:)
    mssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfp
    gtlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvad
    pavmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamda
    gfdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigir
    ispwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseed
    qagdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklr
    dgidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaieal
    

    Sequence, based on observed residues (ATOM records): (download)
    >4qaiE (E:)
    ssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfpg
    tlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvadp
    avmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamdag
    fdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigiri
    spwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseedq
    agdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklrd
    gidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaie
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >4qaiF (F:)
    mssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfp
    gtlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvad
    pavmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamda
    gfdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigir
    ispwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseed
    qagdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklr
    dgidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaieal
    

    Sequence, based on observed residues (ATOM records): (download)
    >4qaiF (F:)
    ssvkisplkdseafqsikvgnntlqtkivyppttrfraledhtpsdlqlqyygdrstfpg
    tlliteatfvspqasgwegaapgiwtdkhakawkvitdkvhangsfvstqliflgrvadp
    avmktrglnpvsasatyesdaakeaaeavgnpvralttqevkdlvyeaytnaaqkamdag
    fdyielhaahgylldqflqpctnqrtdeyggsienrarlilelidhlstivgadkigiri
    spwatfqnmkahkdtvhplttfsylvhelqqradkgqgiayisvveprvsgnvdvseedq
    agdnefvskiwkgvilkagnysydapefktlkediadkrtlvgfsryftsnpnlvwklrd
    gidlvpydrntfysdnnygyntfsmdseevdkeleikrvpsaie