PDB entry 4q7j

View 4q7j on RCSB PDB site
Description: Complex structure of viral RNA polymerase
Class: translation/transferase
Keywords: RNA polymerase, RNA binding motif, RNA dependent RNA polymerization, TRANSLATION-TRANSFERASE complex
Deposited on 2014-04-25, released 2014-08-27
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-08-27, with a file datestamp of 2014-08-22.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.258
AEROSPACI score: 0.14 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: elongation factor ts
    Species: Escherichia coli [TaxId:83333]
    Gene: TSF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4q7ja1, d4q7ja2, d4q7ja3
  • Chain 'B':
    Compound: Elongation factor Tu 1
    Species: Escherichia coli [TaxId:83333]
    Gene: TUFA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4q7jb1, d4q7jb2, d4q7jb3
  • Chain 'C':
    Compound: Q beta replicase
    Species: Enterobacteria phage Qbeta [TaxId:39803]
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: 30S ribosomal protein S1
    Species: Escherichia coli [TaxId:83333]
    Gene: rpsA
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: elongation factor ts
    Species: Escherichia coli [TaxId:83333]
    Gene: TSF
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4q7je1, d4q7je2, d4q7je3
  • Chain 'F':
    Compound: Elongation factor Tu 1
    Species: Escherichia coli [TaxId:83333]
    Gene: TUFA
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4q7jf1, d4q7jf2, d4q7jf3
  • Chain 'G':
    Compound: Q beta replicase
    Species: Enterobacteria phage Qbeta [TaxId:39803]
    Database cross-references and differences (RAF-indexed):
  • Chain 'H':
    Compound: 30S ribosomal protein S1
    Species: Escherichia coli [TaxId:83333]
    Gene: rpsA
    Database cross-references and differences (RAF-indexed):
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4q7jA (A:)
aeitaslvkelrertgagmmdckkalteangdielaienmrksgaikaakkagnvaadgv
iktkidgnygiilevncqtdfvakdagfqafadkvldaavagkitdvevlkaqfeeerva
lvakigeninirrvaalegdvlgsyqhgarigvlvaakgadeelvkhiamhvaaskpefi
kpedvsaevvekeyqvqldiamqsgkpkeiaekmvegrmkkftgevsltgqpfvmepskt
vgqllkehnaevtgfirfevgegiekvetdfaaevaamskqs

    Sequence, based on observed residues (ATOM records): (download) 
    >4q7jA (A:)
taslvkelrertgagmmdckkalteangdielaienmrksgaikaakkagnvaadgvikt
kidgnygiilevncqtdfvakdagfqafadkvldaavagkitdvevlkaqfeeervalva
kigeninirrvaalegdvlgsyqhgarigvlvaakgadeelvkhiamhvaaskpefikpe
dvsaevvekeyqvqldiamqsgkpkeiaekmvegrmkkftgevsltgqpfvmepsktvgq
llkehnaevtgfirfevgegiekvetdfaaevaamskq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4q7jB (B:)
skekfertkphvnvgtighvdhgkttltaaittvlaktyggaarafdqidnapeekargi
tintshveydtptrhyahvdcpghadyvknmitgaaqmdgailvvaatdgpmpqtrehil
lgrqvgvpyiivflnkcdmvddeellelvemevrellsqydfpgddtpivrgsalkaleg
daeweakilelagfldsyipeperaidkpfllpiedvfsisgrgtvvtgrvergiikvge
eveivgiketqkstctgvemfrklldegragenvgvllrgikreeiergqvlakpgtikp
htkfesevyilskdeggrhtpffkgyrpqfyfrttdvtgtielpegvemvmpgdnikmvv
tlihpiamddglrfaireggrtvgagvvakvlg

    Sequence, based on observed residues (ATOM records): (download) 
    >4q7jB (B:)
tkphvnvgtighvdhgkttltaaittvlaktygshveydtptrhyahvdcpghadyvknm
itgaaqmdgailvvaatdgpmpqtrehillgrqvgvpyiivflnkcdmvddeellelvem
evrellsqydfpgddtpivrgsalkalegdaeweakilelagfldsyipeperaidkpfl
lpiedvfsisgrgtvvtgrvergiikvgeeveivgiketqkstctgvemfrklldegrag
envgvllrgikreeiergqvlakpgtikphtkfesevyilskdeggrhtpffkgyrpqfy
frttdvtgtielpegvemvmpgdnikmvvtlihpiamddglrfaireggrtvgagvvakv
lg

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >4q7jE (E:)
aeitaslvkelrertgagmmdckkalteangdielaienmrksgaikaakkagnvaadgv
iktkidgnygiilevncqtdfvakdagfqafadkvldaavagkitdvevlkaqfeeerva
lvakigeninirrvaalegdvlgsyqhgarigvlvaakgadeelvkhiamhvaaskpefi
kpedvsaevvekeyqvqldiamqsgkpkeiaekmvegrmkkftgevsltgqpfvmepskt
vgqllkehnaevtgfirfevgegiekvetdfaaevaamskqs

    Sequence, based on observed residues (ATOM records): (download) 
    >4q7jE (E:)
itaslvkelrertgagmmdckkalteangdielaienmrksgaikaakkagnvaadgvik
tkidgnygiilevncqtdfvakdagfqafadkvldaavagkitdvevlkaqfeeervalv
akigeninirrvaalegdvlgsyqhgarigvlvaakgadeelvkhiamhvaaskpefikp
edvsaevvekeyqvqldiamqsgkpkeiaekmvegrmkkftgevsltgqpfvmepsktvg
qllkehnaevtgfirfevgegiekvetdfaaevaamskqs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >4q7jF (F:)
skekfertkphvnvgtighvdhgkttltaaittvlaktyggaarafdqidnapeekargi
tintshveydtptrhyahvdcpghadyvknmitgaaqmdgailvvaatdgpmpqtrehil
lgrqvgvpyiivflnkcdmvddeellelvemevrellsqydfpgddtpivrgsalkaleg
daeweakilelagfldsyipeperaidkpfllpiedvfsisgrgtvvtgrvergiikvge
eveivgiketqkstctgvemfrklldegragenvgvllrgikreeiergqvlakpgtikp
htkfesevyilskdeggrhtpffkgyrpqfyfrttdvtgtielpegvemvmpgdnikmvv
tlihpiamddglrfaireggrtvgagvvakvlg

    Sequence, based on observed residues (ATOM records): (download) 
    >4q7jF (F:)
rtkphvnvgtighvdhgkttltaaittvlaktygtshveydtptrhyahvdcpghadyvk
nmitgaaqmdgailvvaatdgpmpqtrehillgrqvgvpyiivflnkcdmvddeellelv
emevrellsqydfpgddtpivrgsalkalegdaeweakilelagfldsyipeperaidkp
fllpiedvfsisgrgtvvtgrvergiikvgeeveivgiketqkstctgvemfrklldegr
agenvgvllrgikreeiergqvlakpgtikphtkfesevyilskdeggrhtpffkgyrpq
fyfrttdvtgtielpegvemvmpgdnikmvvtlihpiamddglrfaireggrtvgagvva
kvlg

  • Chain 'G':
    No sequence available.

  • Chain 'H':
    No sequence available.