PDB entry 4pmy

View 4pmy on RCSB PDB site
Description: Crystal structure of GH10 endo-b-1,4-xylanase (XynB) from Xanthomonas axonopodis pv citri complexed with xylose
Class: hydrolase
Keywords: xylanase
Deposited on 2014-05-22, released 2014-10-08
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-11-26, with a file datestamp of 2014-11-21.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.188
AEROSPACI score: 0.51 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: xylanase
    Species: Xanthomonas axonopodis pv. citri [TaxId:190486]
    Gene: xynB, XAC4254
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4pmya_
  • Chain 'B':
    Compound: xylanase
    Species: Xanthomonas axonopodis pv. citri [TaxId:190486]
    Gene: xynB, XAC4254
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4pmyb_
  • Heterogens: XYP, GOL, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4pmyA (A:)
    aplaataskflgcaygaqqapgfaqywnkltpenggkwgsveavrdqmdwstldaayrfa
    qanqmpfqmhvmvwgnqqpewiktlrpaeqrreieqwfaavaqrypdiallevvneplnd
    ppskadtgggnylqalggngdsgwewvlqsfrlarrhfphtklmindysitssaqatqky
    lqivrllqrenlvdaigvqehafettpevavsvhrdnldalaatglpiyitefdldgptd
    aqqladykrvfpvfwehpavhgitlwgfrpglwrdkeaayliradgterpaltwlrdyva
    ahp
    

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4pmyB (B:)
    aplaataskflgcaygaqqapgfaqywnkltpenggkwgsveavrdqmdwstldaayrfa
    qanqmpfqmhvmvwgnqqpewiktlrpaeqrreieqwfaavaqrypdiallevvneplnd
    ppskadtgggnylqalggngdsgwewvlqsfrlarrhfphtklmindysitssaqatqky
    lqivrllqrenlvdaigvqehafettpevavsvhrdnldalaatglpiyitefdldgptd
    aqqladykrvfpvfwehpavhgitlwgfrpglwrdkeaayliradgterpaltwlrdyva
    ahp