PDB entry 4plj

View 4plj on RCSB PDB site
Description: Hepatitis E Virus E2s domain (Genotype IV) in complex with a neutralizing antibody 8G12
Class: viral protein/immume system
Keywords: Complex, neutralizing antibody, VIRAL PROTEIN-IMMUME SYSTEM complex
Deposited on 2014-05-18, released 2015-04-15
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-05-13, with a file datestamp of 2015-05-08.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: N/A
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: capsid protein
    Species: Hepatitis E virus [TaxId:12461]
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: capsid protein
    Species: Hepatitis E virus [TaxId:12461]
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: 8G12 light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLJ (0-End)
    Domains in SCOPe 2.06: d4pljc1, d4pljc2
  • Chain 'D':
    Compound: 8G12 heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLJ (0-End)
  • Chain 'H':
    Compound: 8G12 heavy chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLJ (0-End)
  • Chain 'L':
    Compound: 8G12 light chain
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 4PLJ (0-211)
    Domains in SCOPe 2.06: d4pljl1, d4pljl2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4pljC (C:)
    diqmtqspaslsvsvgetvtitcraseniysnlvwyqqkqgkspqvlvyaatnlpdgvps
    rfsgsgsgtqyslkinslqsedsgsyycqhfwetpftfgsgtkleikradaaptvsifpp
    ssekvlsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrn
    

    Sequence, based on observed residues (ATOM records): (download)
    >4pljC (C:)
    diqmtqspaslsvsvgetvtitcraseniysnlvwyqqkqgkspqvlvyaatnlpdgvps
    rfsgsgsgtqyslkinslqsedsgsyycqhfwetpftfgsgtkleikradaaptvsifpp
    ssekvlsggasvvcflnnfypkdinvkwkidgsvlnswtdqdskdstysmsstltltkde
    yerhnsytceatspivksfnr
    

  • Chain 'D':
    No sequence available.

  • Chain 'H':
    No sequence available.

  • Chain 'L':
    Sequence; same for both SEQRES and ATOM records: (download)
    >4pljL (L:)
    diqmtqspaslsvsvgetvtitcraseniysnlvwyqqkqgkspqvlvyaatnlpdgvps
    rfsgsgsgtqyslkinslqsedsgsyycqhfwetpftfgsgtkleikradaaptvsifpp
    ssekvlsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
    ltkdeyerhnsytceathktstspivksfnrn