PDB entry 4pj9
View 4pj9 on RCSB PDB site
Description: Structure of human MR1-5-OP-RU in complex with human MAIT TRAJ20 TCR
Class: immune system
Keywords: MR1, TCR, Immune complex, 5-OP-RU, IMMUNE SYSTEM
Deposited on
2014-05-12, released
2014-07-02
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-07-02, with a file datestamp of
2014-06-27.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.174
AEROSPACI score: 0.39
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Major histocompatibility complex class I-related gene protein
Species: Homo sapiens [TaxId:9606]
Gene: MR1
Database cross-references and differences (RAF-indexed):
- Uniprot Q95460 (1-270)
- initiating methionine (0)
- engineered mutation (261)
- Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M, CDABP0092, HDCMA22P
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-End)
- initiating methionine (0)
Domains in SCOPe 2.04: d4pj9b_ - Chain 'C':
Compound: TCR-alpha
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4pj9c1, d4pj9c2 - Chain 'D':
Compound: TCR-beta
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4pj9d1, d4pj9d2 - Heterogens: 2LJ, GOL, NA, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4pj9B (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
Sequence, based on observed residues (ATOM records): (download)
>4pj9B (B:)
miqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskd
wsfyllyyteftptekdeyacrvnhvtlsqpkivkwdr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4pj9C (C:)
gqnidqptemtategaivqinctyqtsgfnglfwyqqhageaptflsynvldgleekgrf
ssflsrskgysylllkelqmkdsasylcavrdgdyklsfgagttvtvraniqnpdpavyq
lrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdf
acanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>4pj9C (C:)
qnidqptemtategaivqinctyqtsgfnglfwyqqhageaptflsynvldgleekgrfs
sflsrskgysylllkelqmkdsasylcavrdgdyklsfgagttvtvraniqnpdpavyql
rdsksksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsacanafnn
siipedtffp
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4pj9D (D:)
iagitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkgev
pdgysvsrantddfpltlasavpsqtsvyfcassagastgelffgegsrltvledlknvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
alndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
rad
Sequence, based on observed residues (ATOM records): (download)
>4pj9D (D:)
agitqaptsqilaagrrmtlrctqdmrhnamywyrqdlglglrlihysntagttgkgevp
dgysvsrantddfpltlasavpsqtsvyfcassagastgelffgegsrltvledlknvfp
pevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpa
lndsryalssrlrvsatfwqnprnhfrcqvqfygldrakpvtqivsaeaw