PDB entry 4pgj

View 4pgj on RCSB PDB site
Description: Human heavy-chain domain antibody in complex with hen egg-white lysozyme
Class: immune system/hydrolase
Keywords: antibody human dAb cleft binder dAb-HEL complex, IMMUNE SYSTEM-HYDROLASE complex
Deposited on 2014-05-02, released 2015-03-11
The last revision prior to the SCOPe 2.07 freeze date was dated 2017-11-01, with a file datestamp of 2017-10-27.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: N/A
AEROSPACI score: 0.19 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Human heavy chain domain antibody
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4PGJ
    Domains in SCOPe 2.07: d4pgja_
  • Chain 'B':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Gene:
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4pgjb_
  • Chain 'C':
    Compound: Human heavy chain domain antibody
    Species: Homo sapiens [TaxId:9606]
    Gene:
    Database cross-references and differences (RAF-indexed):
    • PDB 4PGJ
    Domains in SCOPe 2.07: d4pgjc_
  • Chain 'D':
    Compound: Lysozyme C
    Species: Gallus gallus [TaxId:9031]
    Gene:
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4pgjd_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4pgjA (A:)
    evqllesggglvqpggslrlscaasgfrfdaedmgwvrqapgkglewvssiygpsgstyy
    adsvkgrftisrdnskntlylqmnslraedtavyycakytsppqnhgfdywgqgtlvtvs
    s
    

    Sequence, based on observed residues (ATOM records): (download)
    >4pgjA (A:)
    vqllesggglvqpggslrlscaasgfrfdaedmgwvrqapgkglewvssiygpsgstyya
    dsvkgrftisrdnskntlylqmnslraedtavyycakytsppqnhgfdywgqgtlvtvs
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4pgjB (B:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >4pgjB (B:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdngmnawvawrnrckgtdvq
    awirgcr
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4pgjC (C:)
    evqllesggglvqpggslrlscaasgfrfdaedmgwvrqapgkglewvssiygpsgstyy
    adsvkgrftisrdnskntlylqmnslraedtavyycakytsppqnhgfdywgqgtlvtvs
    s
    

    Sequence, based on observed residues (ATOM records): (download)
    >4pgjC (C:)
    qllesggglvqpggslrlscaasgfrfedmgwvrqkglewvssiygpsgstyyadsvkgr
    ftisrntlylqmnslraedtavyycakytsppqnhgfdywgqgtlvtvs
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4pgjD (D:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcrl
    

    Sequence, based on observed residues (ATOM records): (download)
    >4pgjD (D:)
    kvfgrcelaaamkrhgldnyrgyslgnwvcaakfesnfntqatnrntdgstdygilqins
    rwwcndgrtpgsrnlcnipcsallssditasvncakkivsdgngmnawvawrnrckgtdv
    qawirgcr