PDB entry 4pft

View 4pft on RCSB PDB site
Description: Crystal structure of mannobiose bound oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (TM1223) from THERMOTOGA MARITIMA at 1.75 A resolution
Class: transport protein
Keywords: oligopeptide ABC transporter, periplasmic oligopeptide-binding protein, TRANSPORT PROTEIN
Deposited on 2014-04-30, released 2014-09-17
The last revision prior to the SCOPe 2.08 freeze date was dated 2020-07-29, with a file datestamp of 2020-07-04.
Experiment type: XRAY
Resolution: 1.75 Å
R-factor: N/A
AEROSPACI score: 0.47 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: ABC transporter substrate-binding protein
    Species: Thermotoga maritima [TaxId:243274]
    Gene: TM_1223, THEMA_08215, Tmari_1230
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X0V0 (Start-537)
      • expression tag (538)
    Domains in SCOPe 2.08: d4pfta1, d4pfta2
  • Chain 'B':
    Compound: ABC transporter substrate-binding protein
    Species: Thermotoga maritima [TaxId:243274]
    Gene: TM_1223, THEMA_08215, Tmari_1230
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9X0V0 (1-537)
      • expression tag (538)
    Domains in SCOPe 2.08: d4pftb1, d4pftb2
  • Heterogens: MG, NO3, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4pftA (A:)
mtfernktlywggalwsppsnwnpftpwnavagtiglvyeplflydplndkfepwlaekg
ewvsnneyvltlrkglrwqdgvpltaddvvftfeiakkytgisyspvwnwlgriervder
tlkfvfsdpryqewkqmlintpivpkhiwenkteeevlqaanenpvgsgpyyveswaddr
cvfkkngnwwgirelgydpkperivelrvlsnnvavgmlmkgeldwsnfflpgvpvlkka
ygivtwyenapymlpantagiyinvnkyplsipefrramayainpekivtrayenmvtaa
npagilplpgymkyypkevvdkygfkydpemakkildelgfkdvnkdgfredpngkpfkl
tiecpygwtdwmvsiqsiaedlvkvginvepkypdyskyaddlyggkfdlilnnfttgvs
atiwsyfngvfypdaveseysysgnfgkyanpevetlldelnrsnddakikevvaklsei
llkdlpfiplwyngawfqaseavwtnwpteknpyavpigwngwwqltgiktlfgieakhh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pftA (A:)
fernktlywggalwsppsnwnpftpwnavagtiglvyeplflydplndkfepwlaekgew
vsnneyvltlrkglrwqdgvpltaddvvftfeiakkytgisyspvwnwlgriervdertl
kfvfsdpryqewkqmlintpivpkhiwenkteeevlqaanenpvgsgpyyveswaddrcv
fkkngnwwgirelgydpkperivelrvlsnnvavgmlmkgeldwsnfflpgvpvlkkayg
ivtwyenapymlpantagiyinvnkyplsipefrramayainpekivtrayenmvtaanp
agilplpgymkyypkevvdkygfkydpemakkildelgfkdvnkdgfredpngkpfklti
ecpygwtdwmvsiqsiaedlvkvginvepkypdyskyaddlyggkfdlilnnfttgvsat
iwsyfngvfypdaveseysysgnfgkyanpevetlldelnrsnddakikevvaklseill
kdlpfiplwyngawfqaseavwtnwpteknpyavpigwngwwqltgiktlfgieakh

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4pftB (B:)
mtfernktlywggalwsppsnwnpftpwnavagtiglvyeplflydplndkfepwlaekg
ewvsnneyvltlrkglrwqdgvpltaddvvftfeiakkytgisyspvwnwlgriervder
tlkfvfsdpryqewkqmlintpivpkhiwenkteeevlqaanenpvgsgpyyveswaddr
cvfkkngnwwgirelgydpkperivelrvlsnnvavgmlmkgeldwsnfflpgvpvlkka
ygivtwyenapymlpantagiyinvnkyplsipefrramayainpekivtrayenmvtaa
npagilplpgymkyypkevvdkygfkydpemakkildelgfkdvnkdgfredpngkpfkl
tiecpygwtdwmvsiqsiaedlvkvginvepkypdyskyaddlyggkfdlilnnfttgvs
atiwsyfngvfypdaveseysysgnfgkyanpevetlldelnrsnddakikevvaklsei
llkdlpfiplwyngawfqaseavwtnwpteknpyavpigwngwwqltgiktlfgieakhh
hhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >4pftB (B:)
tfernktlywggalwsppsnwnpftpwnavagtiglvyeplflydplndkfepwlaekge
wvsnneyvltlrkglrwqdgvpltaddvvftfeiakkytgisyspvwnwlgriervdert
lkfvfsdpryqewkqmlintpivpkhiwenkteeevlqaanenpvgsgpyyveswaddrc
vfkkngnwwgirelgydpkperivelrvlsnnvavgmlmkgeldwsnfflpgvpvlkkay
givtwyenapymlpantagiyinvnkyplsipefrramayainpekivtrayenmvtaan
pagilplpgymkyypkevvdkygfkydpemakkildelgfkdvnkdgfredpngkpfklt
iecpygwtdwmvsiqsiaedlvkvginvepkypdyskyaddlyggkfdlilnnfttgvsa
tiwsyfngvfypdaveseysysgnfgkyanpevetlldelnrsnddakikevvaklseil
lkdlpfiplwyngawfqaseavwtnwpteknpyavpigwngwwqltgiktlfgieakh