PDB entry 4pfn

View 4pfn on RCSB PDB site
Description: Crystal structure of Plasmodium vivax SHMT with L-serine Schiff base
Class: transferase
Keywords: transferase, PLP-dependent protein, alpha and beta protein, methyltransferase activity
Deposited on 2014-04-30, released 2014-12-17
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-01-07, with a file datestamp of 2015-01-02.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.213
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Serine hydroxymethyltransferase, putative
    Species: Plasmodium vivax [TaxId:126793]
    Gene: PVX_100730
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4pfna_
  • Chain 'B':
    Compound: Serine hydroxymethyltransferase, putative
    Species: Plasmodium vivax [TaxId:126793]
    Gene: PVX_100730
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4pfnb_
  • Chain 'C':
    Compound: Serine hydroxymethyltransferase, putative
    Species: Plasmodium vivax [TaxId:126793]
    Gene: PVX_100730
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4pfnc_
  • Heterogens: PLP, SER, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4pfnA (A:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdcvspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4pfnB (B:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdcvspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4pfnC (C:)
mfnnepleqidkelhdiladeekrqretinliasenltngavreclgnrvsnkysegypk
kryyggndfidkieelcqkraleafnvsdeewgvnvqplsgsaanvqalyalvgvkgkim
gmhlcsgghlthgffdekkkvsitsdmfesklykcnsqgyvdldavremalsfkpkviic
gytsyprdidyqqfrqicdevnaylfadishissfvacnilnnpflhadvvtttthkilr
gprsaliffnkkrnpgieqkinsavfpsfqggphnnkiaavacqlkevhspafkeytqqv
llnskalakaliskqidlvtngtdnhlivvdlrkfsitgsklqetcnainvslnkntips
dvdcvspsgvrigtpamttrgakekdmefiadvlaraikitvdlqeqygkklvdfkkglp
gnaqlqqlkqevvtwagalpfp