PDB entry 4ozf

View 4ozf on RCSB PDB site
Description: JR5.1 protein complex
Class: immune system
Keywords: immune receptor-ligand complex, immune system
Deposited on 2014-02-15, released 2014-04-16
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-04-22, with a file datestamp of 2015-04-17.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.17 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: HLA class II histocompatibility antigen, DQ alpha 1 chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DQA1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4ozfa1, d4ozfa2
  • Chain 'B':
    Compound: HLA class II histocompatibility antigen, DQ beta 1 chain
    Species: Homo sapiens [TaxId:9606]
    Gene: HLA-DQB1
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4ozfb1, d4ozfb2
  • Chain 'G':
    Compound: T-cell receptor, jr5.1 alpha chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZF (0-End)
    Domains in SCOPe 2.06: d4ozfg1, d4ozfg2
  • Chain 'H':
    Compound: T-cell receptor, jr5.1 beta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZF
    Domains in SCOPe 2.06: d4ozfh1, d4ozfh2
  • Chain 'J':
    Compound: deamidated Gliadin-alpha2 peptide
    Species: Triticum aestivum [TaxId:4565]
    Database cross-references and differences (RAF-indexed):
    • PDB 4OZF (0-12)
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4ozfA (A:)
edivadhvasygvnlyqsygpsgqythefdgdeqfyvdlgrketvwclpvlrqfrfdpqf
altniavlkhnlnslikrsnstaatnevpevtvfskspvtlgqpniliclvdnifppvvn
itwlsnghsvtegvsetsflsksdhsffkisyltllpsaeesydckvehwgldkpllkhw
epetsgddddk

    Sequence, based on observed residues (ATOM records): (download) 
    >4ozfA (A:)
ivadhvasygvnlyqsygpsgqythefdgdeqfyvdlgrketvwclpvlrqfrfdpqfal
tniavlkhnlnslikrsnstaatnevpevtvfskspvtlgqpniliclvdnifppvvnit
wlsnghsvtegvsetsflsksdhsffkisyltllpsaeesydckvehwgldkpllkhwep
e

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4ozfB (B:)
ggsiegrggsgasrdspedfvyqfkgmcyftngtervrlvsrsiynreeivrfdsdvgef
ravtllglpaaeywnsqkdilerkraavdrvcrhnyqlelrttlqrrveptvtispsrte
alnhhnllvcsvtdfypaqikvrwfrndqeetagvvstplirngdwtfqilvmlemtpqr
gdvytchvehpslqspitvewraqstggddddk

    Sequence, based on observed residues (ATOM records): (download) 
    >4ozfB (B:)
spedfvyqfkgmcyftngtervrlvsrsiynreeivrfdsdvgefravtllglpaaeywn
sqkdilerkraavdrvcrhnyqlelrttlqrrveptvtispshnllvcsvtdfypaqikv
rwfrndqeetagvvstplirngdwtfqilvmlemtpqrgdvytchvehpslqspitvewr
a

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >4ozfG (G:)
mkttqppsmdcaegraanlpcnhstisgneyvywyrqihsqgpqyiihglknnetnemas
liitedrksstlilphatlrdtavyyciafqgaqklvfgqgtrltinpniqnpdpavyql
rdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdfa
canafnnsiipedtffpspess

    Sequence, based on observed residues (ATOM records): (download) 
    >4ozfG (G:)
mkttqppsmdcaegraanlpcnhstisgneyvywyrqihsqgpqyiihglknnetnemas
liitedrksstlilphatlrdtavyyciafqgaqklvfgqgtrltinpniqnpdpavyql
rdsdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnksdacana
fnnsiipedtffp

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4ozfH (H:)
mgvsqspsnkvtekgkdvelrcdpisghtalywyrqslgqglefliyfqgnsapdksglp
sdrfsaertggsvstltiqrtqqedsavylcassfralaadtqyfgpgtrltvledlknv
fppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeq
palndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
grad

    Sequence, based on observed residues (ATOM records): (download) 
    >4ozfH (H:)
gvsqspsnkvtekgkdvelrcdpisghtalywyrqslgqglefliyfqgnsapdksglps
drfsaertggsvstltiqrtqqedsavylcassfralaadtqyfgpgtrltvledlknvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
alndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
ra

  • Chain 'J':
    No sequence available.