PDB entry 4od1

View 4od1 on RCSB PDB site
Description: Crystal structure of human Fab CAP256-VRC26.03, a potent V1V2-directed HIV-1 neutralizing antibody
Class: immune system
Keywords: Fab, HIV-1, V1V2, CAP256, VRC26, IMMUNE SYSTEM
Deposited on 2014-01-09, released 2014-02-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-05-14, with a file datestamp of 2014-05-09.
Experiment type: XRAY
Resolution: 2.69 Å
R-factor: 0.205
AEROSPACI score: 0.22 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'H':
    Compound: CAP256-VRC26.03 heavy chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4OD1 (0-End)
    Domains in SCOPe 2.08: d4od1h_
  • Chain 'L':
    Compound: CAP256-VRC26.03 light chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4OD1
    Domains in SCOPe 2.08: d4od1l1, d4od1l2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >4od1H (H:)
vqlvesgggvvqpgkslrlscaasrfsfnrygmhwvrqapgkglewvaaisydgtdkyha
dkvwgrftisrdnskntlylqmnslraedtalyycakdlredeceewwsdyydfgkqlpc
rksrgvagifdgwgqgtmvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepv
tvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkr
vepkscdkglevlfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4od1H (H:)
vqlvesgggvvqpgkslrlscaasrfsfnrygmhwvrqapgkglewvaaisydgtdkyha
dkvwgrftisrdnskntlylqmnslraedtalyycakdlredeceewwsdyydfgkqlpc
rksrgvagifdgwgqgtmvtvssastkgpsvfplapsskstsggtaalgclvkdyfpepv
tvswnsgaltsgvhtfpavlqssglyslssvvtvpssslgtqtyicnvnhkpsntkvdkr
vep

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >4od1L (L:)
qsvltqppsvsaapgqkvtiscsgsssnignnfvswyqqrpgtapkiliyennkrpsetp
drfsgsksgtsatlaitglqtadeaeyycatwsaslssarvfgtgtritvlgqpkanptv
tlfppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaas
sylsltpeqwkshrsyscqvthegstvektvaptecs

    Sequence, based on observed residues (ATOM records): (download) 
    >4od1L (L:)
vltqppsvsaapgqkvtiscsgsssnignnfvswyqqrpgtapkiliyennkrpsetpdr
fsgsksgtsatlaitglqtadeaeyycatwsaslssarvfgtgtritvlgqpkanptvtl
fppsseelqankatlvclisdfypgavtvawkadsspvkagvetttpskqsnnkyaassy
lsltpeqwkshrsyscqvthegstvektvap