PDB entry 4nd1
View 4nd1 on RCSB PDB site
Description: Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with cofactor (b-nicotinamide adenine dinucleotide) and inhibitor (oxamic acid)
Class: Oxidoreductase/Oxidoreductase inhibitor
Keywords: Rossmann Fold, Dehydrogenase, NAD binding, Oxidoreductase-Oxidoreductase inhibitor complex
Deposited on
2013-10-25, released
2014-12-17
The last revision prior to the SCOPe 2.08 freeze date was dated
2019-07-17, with a file datestamp of
2019-07-12.
Experiment type: XRAY
Resolution: 2.15 Å
R-factor: N/A
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase
Species: Cryptosporidium parvum [TaxId:353152]
Gene: cgd7_480, LDH1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4nd1a1, d4nd1a2 - Chain 'B':
Compound: Lactate dehydrogenase, adjacent gene encodes predicted malate dehydrogenase
Species: Cryptosporidium parvum [TaxId:353152]
Gene: cgd7_480, LDH1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d4nd1b1, d4nd1b2 - Heterogens: NAD, OXM, GOL, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4nd1A (A:)
mierrkiavigsgqiggniayivgkdnladvvlfdiaegipqgkaldithsmvmfgstsk
vigtndyadisgsdvviitasipgrpkddrsellfgnarildsvaegvkkycpnafvici
tnpldvmvshfqkvsglphnkvcgmagvldssrfrtfiaqhfgvnasdvsanvigghgdg
mvpatssvsvggvplssfikqglitqeqideivchtriawkevadnlktgtayfapaaaa
vkmaeaylkdkkavvpcsafcsnhygvkgiymgvptiigkngvedileldltpleqkllg
esinevntiskvldnapaaga
Sequence, based on observed residues (ATOM records): (download)
>4nd1A (A:)
mierrkiavigsgqiggniayivgkdnladvvlfdiaegipqgkaldithsmvmfgstsk
vigtndyadisgsdvviitasipgrpkddrsellfgnarildsvaegvkkycpnafvici
tnpldvmvshfqkvsglphnkvcgmagvldssrfrtfiaqhfgvnasdvsanvigghgdg
mvpatssvsvggvplssfikqglitqeqideivchtriawkevadnlktgtayfapaaaa
vkmaeaylkdkkavvpcsafcsnhygvkgiymgvptiigkngvedileldltpleqkllg
esinevntiskvldnap
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4nd1B (B:)
mierrkiavigsgqiggniayivgkdnladvvlfdiaegipqgkaldithsmvmfgstsk
vigtndyadisgsdvviitasipgrpkddrsellfgnarildsvaegvkkycpnafvici
tnpldvmvshfqkvsglphnkvcgmagvldssrfrtfiaqhfgvnasdvsanvigghgdg
mvpatssvsvggvplssfikqglitqeqideivchtriawkevadnlktgtayfapaaaa
vkmaeaylkdkkavvpcsafcsnhygvkgiymgvptiigkngvedileldltpleqkllg
esinevntiskvldnapaaga
Sequence, based on observed residues (ATOM records): (download)
>4nd1B (B:)
mierrkiavigsgqiggniayivgkdnladvvlfdiaegipqgkaldithsmvmfgstsk
vigtndyadisgsdvviitasipgrpkddrsellfgnarildsvaegvkkycpnafvici
tnpldvmvshfqkvsglphnkvcgmagvldssrfrtfiaqhfgvnasdvsanvigghgdg
mvpatssvsvggvplssfikqglitqeqideivchtriawkevadnlktgtayfapaaaa
vkmaeaylkdkkavvpcsafcsnhygvkgiymgvptiigkngvedileldltpleqkllg
esinevntiskvldnap