PDB entry 4n8g

View 4n8g on RCSB PDB site
Description: Crystal structure of a TRAP periplasmic solute binding protein from Chromohalobacter salexigens DSM 3043 (Csal_0660), Target EFI-501075, with bound D-alanine-D-alanine
Class: transport protein
Keywords: TRAP periplasmic solute binding family, Enzyme Function Initiative, EFI, structural genomics, TRANSPORT PROTEIN
Deposited on 2013-10-17, released 2013-10-30
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: N/A
AEROSPACI score: 0.48 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Chromohalobacter salexigens [TaxId:290398]
    Gene: Csal_0660
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1QZT7 (Start-344)
      • expression tag (345-351)
    Domains in SCOPe 2.08: d4n8ga1, d4n8ga2
  • Chain 'B':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Chromohalobacter salexigens [TaxId:290398]
    Gene: Csal_0660
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q1QZT7 (Start-344)
      • expression tag (345-347)
    Domains in SCOPe 2.08: d4n8gb1, d4n8gb2
  • Chain 'C':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Chromohalobacter salexigens [TaxId:290398]
    Gene: Csal_0660
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4n8gc_
  • Chain 'D':
    Compound: TRAP dicarboxylate transporter, DctP subunit
    Species: Chromohalobacter salexigens [TaxId:290398]
    Gene: Csal_0660
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4n8gd_
  • Heterogens: CL, DAL, SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4n8gA (A:)
mriltprnvllaavttgmmatvslanaattlnlsyngppdtdknavhlfasnlkrlveek
tdgdiqlklypnsmlgeeqermeqvintpslniasfaglspivpeiyvsaipflfedyea
ahqffdegdywnkvedtleertgaellgvieeggfldftnskrpisspedfeglrframd
psqvalyeafgasgtpipwtdtymalktnvadgqmnppmyiimgslyevqkyltlanvqy
sdqfliangewyddlseenrqaieaavqeaselnredvekrvderiqfladqgmeviept
edelaafrekgqpayiewltdeqgidrawiemaledagqsdllanaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4n8gA (A:)
attlnlsyngppdtdknavhlfasnlkrlveektdgdiqlklypnsmlgeeqermeqvin
tpslniasfaglspivpeiyvsaipflfedyeaahqffdegdywnkvedtleertgaell
gvieeggfldftnskrpisspedfeglrframdpsqvalyeafgasgtpipwtdtymalk
tnvadgqmnppmyiimgslyevqkyltlanvqysdqfliangewyddlseenrqaieaav
qeaselnredvekrvderiqfladqgmevieptedelaafrekgqpayiewltdeqgidr
awiemaledagqsdllanaenlyfq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4n8gB (B:)
mriltprnvllaavttgmmatvslanaattlnlsyngppdtdknavhlfasnlkrlveek
tdgdiqlklypnsmlgeeqermeqvintpslniasfaglspivpeiyvsaipflfedyea
ahqffdegdywnkvedtleertgaellgvieeggfldftnskrpisspedfeglrframd
psqvalyeafgasgtpipwtdtymalktnvadgqmnppmyiimgslyevqkyltlanvqy
sdqfliangewyddlseenrqaieaavqeaselnredvekrvderiqfladqgmeviept
edelaafrekgqpayiewltdeqgidrawiemaledagqsdllanaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4n8gB (B:)
attlnlsyngppdtdknavhlfasnlkrlveektdgdiqlklypnsmlgeeqermeqvin
tpslniasfaglspivpeiyvsaipflfedyeaahqffdegdywnkvedtleertgaell
gvieeggfldftnskrpisspedfeglrframdpsqvalyeafgasgtpipwtdtymalk
tnvadgqmnppmyiimgslyevqkyltlanvqysdqfliangewyddlseenrqaieaav
qeaselnredvekrvderiqfladqgmevieptedelaafrekgqpayiewltdeqgidr
awiemaledagqsdllanaen

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4n8gC (C:)
mriltprnvllaavttgmmatvslanaattlnlsyngppdtdknavhlfasnlkrlveek
tdgdiqlklypnsmlgeeqermeqvintpslniasfaglspivpeiyvsaipflfedyea
ahqffdegdywnkvedtleertgaellgvieeggfldftnskrpisspedfeglrframd
psqvalyeafgasgtpipwtdtymalktnvadgqmnppmyiimgslyevqkyltlanvqy
sdqfliangewyddlseenrqaieaavqeaselnredvekrvderiqfladqgmeviept
edelaafrekgqpayiewltdeqgidrawiemaledagqsdllanaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4n8gC (C:)
attlnlsyngppdtdknavhlfasnlkrlveektdgdiqlklypnsmlgeeqermeqvin
tpslniasfaglspivpeiyvsaipflfedyeaahqffdegdywnkvedtleertgaell
gvieeggfldftnskrpisspedfeglrframdpsqvalyeafgasgtpipwtdtymalk
tnvadgqmnppmyiimgslyevqkyltlanvqysdqfliangewyddlseenrqaieaav
qeaselnredvekrvderiqfladqgmevieptedelaafrekgqpayiewltdeqgidr
awiemaledagqsdll

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4n8gD (D:)
mriltprnvllaavttgmmatvslanaattlnlsyngppdtdknavhlfasnlkrlveek
tdgdiqlklypnsmlgeeqermeqvintpslniasfaglspivpeiyvsaipflfedyea
ahqffdegdywnkvedtleertgaellgvieeggfldftnskrpisspedfeglrframd
psqvalyeafgasgtpipwtdtymalktnvadgqmnppmyiimgslyevqkyltlanvqy
sdqfliangewyddlseenrqaieaavqeaselnredvekrvderiqfladqgmeviept
edelaafrekgqpayiewltdeqgidrawiemaledagqsdllanaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4n8gD (D:)
attlnlsyngppdtdknavhlfasnlkrlveektdgdiqlklypnsmlgeeqermeqvin
tpslniasfaglspivpeiyvsaipflfedyeaahqffdegdywnkvedtleertgaell
gvieeggfldftnskrpisspedfeglrframdpsqvalyeafgasgtpipwtdtymalk
tnvadgqmnppmyiimgslyevqkyltlanvqysdqfliangewyddlseenrqaieaav
qeaselnredvekrvderiqfladqgmevieptedelaafrekgqpayiewltdeqgidr
awiemaledagq