PDB entry 4ms8
View 4ms8 on RCSB PDB site
Description: 42F3 TCR pCPB9/H-2Ld Complex
Class: immune system
Keywords: Ig, TCR MHC, IMMUNE SYSTEM
Deposited on
2013-09-18, released
2014-09-24
The last revision prior to the SCOPe 2.04 freeze date was dated
2014-09-24, with a file datestamp of
2014-09-19.
Experiment type: XRAY
Resolution: 1.92 Å
R-factor: 0.182
AEROSPACI score: 0.4
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: H-2 class I histocompatibility antigen, L-D alpha chain
Species: Mus musculus [TaxId:10090]
Gene: H2-L
Database cross-references and differences (RAF-indexed):
- Uniprot P01897 (1-End)
- expression tag (0)
- engineered mutation (8)
- engineered mutation (12)
- engineered mutation (23)
- engineered mutation (30)
- engineered mutation (49)
- engineered mutation (131)
Domains in SCOPe 2.04: d4ms8a_ - Chain 'B':
Compound: pCPB9
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: 42F3 alpha
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4ms8c1, d4ms8c2 - Chain 'D':
Compound: 42F3 beta
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4ms8d1, d4ms8d2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4ms8A (A:)
mgphsmryyetatsrrglgeprytsvgyvddkefvrfdsdaenpryepqvpwmeqegpey
weritqiakgqeqwfrvnlrtllgyynqsaggthtlqwmygcdvgsdgrllrgyeqfayd
gcdyialnedlrtwtaadmaaqitrrkweqagaaeyyraylegecvewlhrylkngnatl
Sequence, based on observed residues (ATOM records): (download)
>4ms8A (A:)
mgphsmryyetatsprytsvgyvddkefvrfdsdaenpryepqvpwmeqegpeyweritq
iakgqeqwfrvnlrtllgyhtlqwmygcdvgsdgrllrgyeqfaydgcdyialnedlrtw
taadmaaqitrrkweqagaaeyyraylegecvewlhrylkng
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4ms8C (C:)
gshmaqsvtqpdarvtvsegaslqlrckysysatpylfwyvqyprqglqmllkyysgdpv
vqgvngfeaefsksdssfhlrkasvhwsdsavyfcavsakgtgsklsfgkgakltvspni
qnpdpavyqlrdskssdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsa
vawsnksdfacanafnnsiipedtffpspess
Sequence, based on observed residues (ATOM records): (download)
>4ms8C (C:)
svtqpdarvtvsegaslqlrckysysatpylfwyvqyprqglqmllkyysgdpvvqgvng
feaefsksdssfhlrkasvhwsdsavyfcavsakgtgsklsfgkgakltvspniqnpdpa
vyqlrdsksdksvclftdfdsqtnvsqskdsdvyitdkcvldmrsmdfksnsavawsnkd
facanafnsiipedtf
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4ms8D (D:)
mgeaavtqsprnkvtvtggnvtlscrqtnshnymywyrqdtghglrlihysygagnlqig
dvpdgykatrttqedfflllelaspsqtslyfcassdapgqlyfgegskltvledlknvf
ppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqp
alndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawg
rad
Sequence, based on observed residues (ATOM records): (download)
>4ms8D (D:)
avtqsprnkvtvtggnvtlscrqtnshnymywyrqdtghglrlihysygagnlqigdvpd
gykatrttqedfflllelaspsqtslyfcassdapgqlyfgegskltvledlknvfppev
avfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpqplkeqpalnd
sryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeawgrad