PDB entry 4mco

View 4mco on RCSB PDB site
Description: Crystal structure of a TRAP periplasmic solute binding protein from Rhodoferax ferrireducens (Rfer_1840), target EFI-510211, with bound malonate
Class: transport protein
Keywords: TRAP periplasmic solute binding family, Enzyme Function Initiative, EFI, structural genomics, TRANSPORT PROTEIN
Deposited on 2013-08-21, released 2013-09-04
The last revision prior to the SCOPe 2.06 freeze date was dated 2015-02-25, with a file datestamp of 2015-02-20.
Experiment type: XRAY
Resolution: 1.6 Å
R-factor: 0.15
AEROSPACI score: 0.54 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: TRAP dicarboxylate transporter-DctP subunit
    Species: Rhodoferax ferrireducens [TaxId:338969]
    Gene: Rfer_1840
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q21XD7 (Start-337)
      • expression tag (338-344)
    Domains in SCOPe 2.06: d4mcoa1, d4mcoa2
  • Chain 'B':
    Compound: TRAP dicarboxylate transporter-DctP subunit
    Species: Rhodoferax ferrireducens [TaxId:338969]
    Gene: Rfer_1840
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q21XD7 (Start-337)
      • expression tag (338-343)
    Domains in SCOPe 2.06: d4mcob1, d4mcob2
  • Chain 'C':
    Compound: TRAP dicarboxylate transporter-DctP subunit
    Species: Rhodoferax ferrireducens [TaxId:338969]
    Gene: Rfer_1840
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q21XD7 (Start-337)
      • expression tag (338-344)
    Domains in SCOPe 2.06: d4mcoc1, d4mcoc2
  • Heterogens: MLI, EPE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4mcoA (A:)
mqrrqllqsmgglaastmpfslafaqtsalkishqfpggtikegdfrdrlvrnfaaevek
rskgamkfeiypgsslmktnaqfssmrkgaldmaliplsyaggevpelniglmpglvvsy
eqayswktkpvgieltrvlqekgivliswiwqaggvasrgkpvvepedakgmkirggsre
mdmilkdagaavvslpsneiyaamqtgamdaamtsstsfisfrleevakalttgrtgayw
fmfeplmmskaifdklpkdqrdmlmtvgaemekfaleaakkddidvaavyqkagakvvdl
sdgtikkwqdiarktawkdygaknegcakllalaqqtlaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4mcoA (A:)
lkishqfpggtikegdfrdrlvrnfaaevekrskgamkfeiypgsslmktnaqfssmrkg
aldmaliplsyaggevpelniglmpglvvsyeqayswktkpvgieltrvlqekgivlisw
iwqaggvasrgkpvvepedakgmkirggsremdmilkdagaavvslpsneiyaamqtgam
daamtsstsfisfrleevakalttgrtgaywfmfeplmmskaifdklpkdqrdmlmtvga
emekfaleaakkddidvaavyqkagakvvdlsdgtikkwqdiarktawkdygaknegcak
llalaqqtlaenlyfq

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4mcoB (B:)
mqrrqllqsmgglaastmpfslafaqtsalkishqfpggtikegdfrdrlvrnfaaevek
rskgamkfeiypgsslmktnaqfssmrkgaldmaliplsyaggevpelniglmpglvvsy
eqayswktkpvgieltrvlqekgivliswiwqaggvasrgkpvvepedakgmkirggsre
mdmilkdagaavvslpsneiyaamqtgamdaamtsstsfisfrleevakalttgrtgayw
fmfeplmmskaifdklpkdqrdmlmtvgaemekfaleaakkddidvaavyqkagakvvdl
sdgtikkwqdiarktawkdygaknegcakllalaqqtlaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4mcoB (B:)
salkishqfpggtikegdfrdrlvrnfaaevekrskgamkfeiypgsslmktnaqfssmr
kgaldmaliplsyaggevpelniglmpglvvsyeqayswktkpvgieltrvlqekgivli
swiwqaggvasrgkpvvepedakgmkirggsremdmilkdagaavvslpsneiyaamqtg
amdaamtsstsfisfrleevakalttgrtgaywfmfeplmmskaifdklpkdqrdmlmtv
gaemekfaleaakkddidvaavyqkagakvvdlsdgtikkwqdiarktawkdygaknegc
akllalaqqtlaenlyf

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4mcoC (C:)
mqrrqllqsmgglaastmpfslafaqtsalkishqfpggtikegdfrdrlvrnfaaevek
rskgamkfeiypgsslmktnaqfssmrkgaldmaliplsyaggevpelniglmpglvvsy
eqayswktkpvgieltrvlqekgivliswiwqaggvasrgkpvvepedakgmkirggsre
mdmilkdagaavvslpsneiyaamqtgamdaamtsstsfisfrleevakalttgrtgayw
fmfeplmmskaifdklpkdqrdmlmtvgaemekfaleaakkddidvaavyqkagakvvdl
sdgtikkwqdiarktawkdygaknegcakllalaqqtlaenlyfq

    Sequence, based on observed residues (ATOM records): (download) 
    >4mcoC (C:)
salkishqfpggtikegdfrdrlvrnfaaevekrskgamkfeiypgsslmktnaqfssmr
kgaldmaliplsyaggevpelniglmpglvvsyeqayswktkpvgieltrvlqekgivli
swiwqaggvasrgkpvvepedakgmkirggsremdmilkdagaavvslpsneiyaamqtg
amdaamtsstsfisfrleevakalttgrtgaywfmfeplmmskaifdklpkdqrdmlmtv
gaemekfaleaakkddidvaavyqkagakvvdlsdgtikkwqdiarktawkdygaknegc
akllalaqqtlaenlyfq