PDB entry 4lvh
View 4lvh on RCSB PDB site
Description: Insight into highly conserved H1 subtype-specific epitopes in influenza virus hemagglutinin
Class: immune system
Keywords: influenza virus, Immune system, hemagglutinin, antibody
Deposited on
2013-07-26, released
2014-04-09
The last revision prior to the SCOPe 2.06 freeze date was dated
2014-04-09, with a file datestamp of
2014-04-04.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.234
AEROSPACI score: 0.14
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:644289]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: monoclonal antibody h-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: monoclonal antibody l-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lvhc1, d4lvhc2 - Chain 'D':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:644289]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: monoclonal antibody h-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: monoclonal antibody l-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lvhf1, d4lvhf2 - Chain 'G':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:644289]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: monoclonal antibody h-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: monoclonal antibody l-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lvhi1, d4lvhi2 - Chain 'J':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:644289]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Chain 'K':
Compound: monoclonal antibody h-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: monoclonal antibody l-chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lvhl1, d4lvhl2 - Heterogens: CA, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4lvhC (C:)
diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmss
tltldeyerhnsytceathktstspivksfn
Sequence, based on observed residues (ATOM records): (download)
>4lvhC (C:)
iqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgtg
vparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvsi
fppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsst
ltldeyerhnsytceathktstspivksfn
- Chain 'D':
No sequence available.
- Chain 'E':
No sequence available.
- Chain 'F':
Sequence, based on SEQRES records: (download)
>4lvhF (F:)
diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmss
tltldeyerhnsytceathktstspivksfn
Sequence, based on observed residues (ATOM records): (download)
>4lvhF (F:)
iqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgtg
vparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvsi
fppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsst
ltldeyerhnsytceathktstspivksfn
- Chain 'G':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>4lvhI (I:)
diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmss
tltldeyerhnsytceathktstspivksfn
Sequence, based on observed residues (ATOM records): (download)
>4lvhI (I:)
iqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgtg
vparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvsi
fppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsst
ltldeyerhnsytceathktstspivksfn
- Chain 'J':
No sequence available.
- Chain 'K':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>4lvhL (L:)
diqmtqspaslavspgqratitcrasesvsnyginfinwfqqkpgqppklliytasnkgt
gvparfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvs
ifppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmss
tltldeyerhnsytceathktstspivksfn
Sequence, based on observed residues (ATOM records): (download)
>4lvhL (L:)
iqmtqspaslavspgqratitcraesvsnyginfinwfqqkpgqppklliytasnkgtgv
parfsgsgsgtdftltinpveaedtanyfcqqtkevpytfgggtkleikradaaptvsif
ppsseqltsggasvvcflnnfypkinvkwkidgserqngvlnswtdqdskdstysmsstl
tldeyerhnsytceathktstspivksfn