PDB entry 4lv5
View 4lv5 on RCSB PDB site
Description: Murine IRGa6 bound to Toxoplasma ROP5B, a pseudokinase GDI
Class: Transferase/Hydrolase
Keywords: immune related GTPase, guanine dissociation inhibitor, parasite effector, Transferase-Hydrolase complex
Deposited on
2013-07-25, released
2013-09-25
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-10-02, with a file datestamp of
2013-09-27.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.194
AEROSPACI score: 0.54
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Rhoptry protein 5B
Species: Toxoplasma gondii [TaxId:5811]
Gene: ROP5, ROP5B
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Interferon-inducible GTPase 1
Species: Mus musculus [TaxId:10090]
Gene: Iigp1, Irga6
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4lv5b_ - Heterogens: ADP, BME, EDO, GDP, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4lv5B (B:)
gspgipgsttmgqlfsspksdenndlpssftgyfkkfntgrkiisqeilnlielrmrkgn
iqltnsaisdalkeidssvlnvavtgetgsgkssfintlrgigneeegaaktgvvevtme
rhpykhpnipnvvfwdlpgigstnfppntylekmkfyeydffiiisatrfkkndidiaka
ismmkkefyfvrtkvdsditneadgkpqtfdkekvlqdirlncvntfrengiaeppifll
snknvchydfpvlmdklisdlpiykrhnfmvslpnitdsviekkrqflkqriwlegfaad
lvniipsltflldsdletlkksmkfyrtvfgvdetslqrlardweievdqveamikspav
fkptdeetiqerlsryiqefclangyllpknsflkeifylkyyfldmvtedaktllkeic
lrn
Sequence, based on observed residues (ATOM records): (download)
>4lv5B (B:)
ndlpssftgyfkkfntgrkiisqeilnlielrmrkgniqltnsaisdalkeidssvlnva
vtgetgsgkssfintlrgigneeegaaktgvvevtmerhpykhpnipnvvfwdlpgigst
nfppntylekmkfyeydffiiisatrfkkndidiakaismmkkefyfvrtkvdsditnea
dgkpqtfdkekvlqdirlncvntfrengiaeppifllsnknvchydfpvlmdklisdlpi
ykrhnfmvslpnitdsviekkrqflkqriwlegfaadlvniipsltflldsdletlkksm
kfyrtvfgvdetslqrlardweievdqveamikspavfkpeetiqerlsryiqefclang
yllpknsflkeifylkyyfldmvtedaktllkeicl