PDB entry 4lms

View 4lms on RCSB PDB site
Description: Light harvesting complex PC645 from the cryptophyte Chroomonas sp. CCMP270
Class: photosynthesis
Keywords: thylakoid lumen, PHOTOSYNTHESIS
Deposited on 2013-07-11, released 2014-06-18
The last revision prior to the SCOPe 2.05 freeze date was dated 2014-07-16, with a file datestamp of 2014-07-11.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: 0.145
AEROSPACI score: 0.66 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: cryptophyte phycocyanin (alpha-1 chain)
    Species: Chroomonas sp. [TaxId:3029]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LMS (0-79)
    Domains in SCOPe 2.05: d4lmsa_
  • Chain 'B':
    Compound: cryptophyte phycocyanin (beta chain)
    Species: Chroomonas sp. [TaxId:3029]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LMS
    Domains in SCOPe 2.05: d4lmsb_
  • Chain 'C':
    Compound: cryptophyte phycocyanin (alpha-2 chain)
    Species: Chroomonas sp. [TaxId:3029]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LMS (0-End)
    Domains in SCOPe 2.05: d4lmsc_
  • Chain 'D':
    Compound: cryptophyte phycocyanin (beta chain)
    Species: Chroomonas sp. [TaxId:3029]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LMS
    Domains in SCOPe 2.05: d4lmsd_
  • Heterogens: M1V, DBV, CYC, P6G, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >4lmsA (A:)
rdaqlrapiveifdargcdaknaqytgpksndmnddqcvkvsmqkitvseataakklqef
iggkatainvpiissmtkky

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4lmsB (B:)
mldafsrvvtsadskaayvggadlqalkkfvsegnkrldavnaivsnascivsdavsgmi
cenpalispsgncytnrrmaaclrdaeiilryvsysllsgdssvledrclgglketyasl
gvpaagnaravgimkatcvafinntsnqkklstpagdcsalasecagyfdkvtsala

    Sequence, based on observed residues (ATOM records): (download) 
    >4lmsB (B:)
kaayvggadlqalkkfvsegnkrldavnaivsnascivsdavsgmicenpalispsgncy
tnrrmaaclrdaeiilryvsysllsgdssvledrclgglketyaslgvpaagnaravgim
katcvafinntsnqkklstpagdcsalasecagyfdkvtsal

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4lmsC (C:)
kdaqlrapvvtifdargckdhankeytgpkagnaendeccvkvqmtpikvaddaaalvlk
eclselkgkk

    Sequence, based on observed residues (ATOM records): (download) 
    >4lmsC (C:)
kdaqlrapvvtifdargckdhankeytgpkagnaendeccvkvqmtpikvaddaaalvlk
eclselkg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4lmsD (D:)
mldafsrvvtsadskaayvggadlqalkkfvsegnkrldavnaivsnascivsdavsgmi
cenpalispsgncytnrrmaaclrdaeiilryvsysllsgdssvledrclgglketyasl
gvpaagnaravgimkatcvafinntsnqkklstpagdcsalasecagyfdkvtsala

    Sequence, based on observed residues (ATOM records): (download) 
    >4lmsD (D:)
skaayvggadlqalkkfvsegnkrldavnaivsnascivsdavsgmicenpalispsgnc
ytnrrmaaclrdaeiilryvsysllsgdssvledrclgglketyaslgvpaagnaravgi
mkatcvafinntsnqkklstpagdcsalasecagyfdkvtsal