PDB entry 4lhw

View 4lhw on RCSB PDB site
Description: Crystal structure of Rab8 in its active GppNHp-bound form
Class: protein transport
Keywords: Small GTPase, PROTEIN TRANSPORT
Deposited on 2013-07-01, released 2013-10-09
The last revision prior to the SCOPe 2.03 freeze date was dated 2013-12-18, with a file datestamp of 2013-12-13.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.146
AEROSPACI score: 0.56 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ras-related protein Rab-8A
    Species: Homo sapiens [TaxId:9606]
    Gene: Rab8a, Mel, Rab8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4lhwa_
  • Chain 'B':
    Compound: Ras-related protein Rab-8A
    Species: Homo sapiens [TaxId:9606]
    Gene: Rab8a, Mel, Rab8
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61006 (3-End)
      • expression tag (0-2)
    Domains in SCOPe 2.03: d4lhwb_
  • Chain 'C':
    Compound: Ras-related protein Rab-8A
    Species: Homo sapiens [TaxId:9606]
    Gene: Rab8a, Mel, Rab8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4lhwc_
  • Chain 'D':
    Compound: Ras-related protein Rab-8A
    Species: Homo sapiens [TaxId:9606]
    Gene: Rab8a, Mel, Rab8
    Database cross-references and differences (RAF-indexed):
    • Uniprot P61006 (3-173)
      • expression tag (1-2)
    Domains in SCOPe 2.03: d4lhwd_
  • Chain 'E':
    Compound: Ras-related protein Rab-8A
    Species: Homo sapiens [TaxId:9606]
    Gene: Rab8a, Mel, Rab8
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d4lhwe_
  • Heterogens: MG, GNP, MPD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >4lhwA (A:)
    gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
    dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
    cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lhwA (A:)
    dylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdta
    gqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdv
    ndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >4lhwB (B:)
    gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
    dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
    cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lhwB (B:)
    gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
    dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
    cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdk
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >4lhwC (C:)
    gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
    dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
    cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lhwC (C:)
    dylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdta
    gqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdv
    ndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4lhwD (D:)
    gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
    dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
    cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lhwD (D:)
    shdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwd
    tagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkc
    dvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >4lhwE (E:)
    gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
    dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
    cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lhwE (E:)
    dylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdta
    gqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdv
    ndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk