PDB entry 4lhv
View 4lhv on RCSB PDB site
Description: Crystal structure of Rab8 in its inactive GDP-bound form
Class: protein transport
Keywords: Small GTPase, PROTEIN TRANSPORT
Deposited on
2013-07-01, released
2013-10-09
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-12-18, with a file datestamp of
2013-12-13.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.204
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ras-related protein Rab-8A
Species: Homo sapiens [TaxId:9606]
Gene: Rab8a, Mel, Rab8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lhva1, d4lhva2 - Chain 'B':
Compound: Ras-related protein Rab-8A
Species: Homo sapiens [TaxId:9606]
Gene: Rab8a, Mel, Rab8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lhvb1, d4lhvb2 - Chain 'C':
Compound: Ras-related protein Rab-8A
Species: Homo sapiens [TaxId:9606]
Gene: Rab8a, Mel, Rab8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lhvc_ - Chain 'D':
Compound: Ras-related protein Rab-8A
Species: Homo sapiens [TaxId:9606]
Gene: Rab8a, Mel, Rab8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lhvd_ - Chain 'E':
Compound: Ras-related protein Rab-8A
Species: Homo sapiens [TaxId:9606]
Gene: Rab8a, Mel, Rab8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4lhve1, d4lhve2 - Heterogens: GDP, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4lhvA (A:)
gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
Sequence, based on observed residues (ATOM records): (download)
>4lhvA (A:)
gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
dtttayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdvndkrqv
skergeklaldygikfmetsakaninvenafftlardikakmdkk
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4lhvB (B:)
gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
Sequence, based on observed residues (ATOM records): (download)
>4lhvB (B:)
hdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdt
ayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdvndkrqvsker
geklaldygikfmetsakaninvenafftlardikakmdkk
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4lhvC (C:)
gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
Sequence, based on observed residues (ATOM records): (download)
>4lhvC (C:)
dylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiwdta
yyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdvndkrqvskerg
eklaldygikfmetsakaninvenafftlardikakmdkk
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4lhvD (D:)
gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
Sequence, based on observed residues (ATOM records): (download)
>4lhvD (D:)
dylfkllligdsgvgktcvlfrfsedafnstfistidfkirtieldgkriklqiwdtayy
rgamgimlvyditneksfdnirnwirnieehasadvekmilgnkcdvndkrqvskergek
laldygikfmetsakaninvenafftlardikakmdkk
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4lhvE (E:)
gshdylfkllligdsgvgktcvlfrfsedafnstfistigidfkirtieldgkriklqiw
dtagqerfrtittayyrgamgimlvyditneksfdnirnwirnieehasadvekmilgnk
cdvndkrqvskergeklaldygikfmetsakaninvenafftlardikakmdkk
Sequence, based on observed residues (ATOM records): (download)
>4lhvE (E:)
hdylfkllligdsgvgktcvlfrfsedadfkirtieldgkriklqiwdtayyrgamgiml
vyditneksfdnirnwirnieehasadvekmilgnkcdvndkrqvskergeklaldygik
fmetsakaninvenafftlardikakmd