PDB entry 4lfh

View 4lfh on RCSB PDB site
Description: Crystal Structure of 9C2 TCR
Class: immune system
Keywords: NKT cells, GammaDelta TCR, CD1d, lipid recognition, PBS-44, IMMUNE SYSTEM
Deposited on 2013-06-26, released 2013-10-02
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-11-06, with a file datestamp of 2013-11-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.189
AEROSPACI score: 0.3 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'D':
    Compound: 9C2 TCR delta chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LFH
    Domains in SCOPe 2.07: d4lfhd1, d4lfhd2
  • Chain 'G':
    Compound: 9C2 TCR gamma chain
    Species: Homo sapiens [TaxId:9606]
    Database cross-references and differences (RAF-indexed):
    • PDB 4LFH
    Domains in SCOPe 2.07: d4lfhg1, d4lfhg2
  • Heterogens: ACT, NA, HOH

PDB Chain Sequences:

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >4lfhD (D:)
    etgaqkvtqaqssvsmpvrkavtlnclyetswwsyyifwykqlpskemiflirqgsdeqn
    aksgrysvnfkkaaksvaltisalqledsakyfcalgdpgglntdklifgkgtrvtvepr
    sqphtkpsvfvmkngtnvaclvkefypkdirinlvsskkitefdpaivispsgkynavkl
    gkyedsnsvtcsvqhdnktvhstdfevktdstdhvkpketentkqpsksasglvpr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lfhD (D:)
    qkvtqaqssvsmpvrkavtlnclyetswwsyyifwykqlpskemiflirqgsdeqnaksg
    rysvnfkkaaksvaltisalqledsakyfcalgdpgglntdklifgkgtrvtveprsqph
    tkpsvfvmkngtnvaclvkefypkdirinlvsskkitefdpaivispsgkynavklgkye
    dsnsvtcsvqhdnktvhstdfe
    

  • Chain 'G':
    Sequence, based on SEQRES records: (download)
    >4lfhG (G:)
    etgssnleggtksvtrptrssaeitcdltvinafyihwylhqegkapqrllyydvsnskd
    vlesglspgkyythtprrwswililrnliendsgvyycatwdrgnpkthyykklfgsgtt
    lvvtdkqldadvspkptiflpsiaetklqkagtylcllekffpdvikihwqekksntilg
    sqegntmktndtymkfswltvpeesldkehrcivrhennkngvdqeiifppiktdvitmd
    pkdnasglvpr
    

    Sequence, based on observed residues (ATOM records): (download)
    >4lfhG (G:)
    gtksvtrptrssaeitcdltvinafyihwylhqegkapqrllyydvsnskdvlesglspg
    kyythtprrwswililrnliendsgvyycatwdrykklfgsgttlvvtdkqldadvspkp
    tiflpsiaetklqkagtylcllekffpdvikihwqekksntilgsqegntmktndtymkf
    swltvpeesldkehrcivrhennkngvdqeiifppiktdvit