PDB entry 4lfe
View 4lfe on RCSB PDB site
Description: Crystal structure of geranylgeranyl diphosphate synthase sub1274 (target efi-509455) from streptococcus uberis 0140j with bound magnesium and isopentyl diphosphate, partially liganded complex;
Class: transferase
Keywords: isoprenoid synthase, enzyme function initiative, efi, transferase
Deposited on
2013-06-26, released
2013-07-10
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-07-10, with a file datestamp of
2013-07-05.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.208
AEROSPACI score: 0.47
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Geranylgeranyl diphosphate synthase
Species: Streptococcus uberis [TaxId:218495]
Gene: fps, SUB1274
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4lfea_ - Chain 'B':
Compound: Geranylgeranyl diphosphate synthase
Species: Streptococcus uberis [TaxId:218495]
Gene: fps, SUB1274
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4lfeb_ - Heterogens: IPE, MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4lfeA (A:)
smdklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqipltes
hfkaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgml
aetdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllay
pfwaaarvaqldenllatfleigmiiglafqvrddilditanfeeigktpkkdvmaekmt
yphllglnesyqildesldqaeailrklsdeiafapqkilslierlrlda
Sequence, based on observed residues (ATOM records): (download)
>4lfeA (A:)
smdklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqipltes
hfkaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgml
aetdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllay
pfwaaarvaqldenllatfleigmiiglafqvrddilditakmtyphllglnesyqilde
sldqaeailrklsdeiafapqkilslierlrlda
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4lfeB (B:)
smdklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqipltes
hfkaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgml
aetdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllay
pfwaaarvaqldenllatfleigmiiglafqvrddilditanfeeigktpkkdvmaekmt
yphllglnesyqildesldqaeailrklsdeiafapqkilslierlrlda
Sequence, based on observed residues (ATOM records): (download)
>4lfeB (B:)
dklkkidqtihafycekaviseklneavlysinaggkrirpilfleviealqiplteshf
kaaaalemihtgslihddlpamdnddyrrgqltnhkkfdeatailagdslfldafgmlae
tdfptdvtvdlvrslssasgtfgmvggqmldmaaegkklnlknlqlihrhktgqllaypf
waaarvaqldenllatfleigmiiglafqvrddilditanfeeigktpkkdvmaekmtyp
hllglnesyqildesldqaeailrklsdeiafapqkilslierlrlda