PDB entry 4ksk

View 4ksk on RCSB PDB site
Description: Gumby/Fam105B in complex with ubiquitin
Class: HYDROLASE/protein binding
Keywords: OTU domain, deubiquitinase, ubiquitin, HYDROLASE, HYDROLASE-protein binding complex
Deposited on 2013-05-17, released 2013-06-05
The last revision prior to the SCOPe 2.06 freeze date was dated 2014-11-12, with a file datestamp of 2014-11-07.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.217
AEROSPACI score: 0.26 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein FAM105B
    Species: Homo sapiens [TaxId:9606]
    Gene: FAM105B
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q96BN8
      • engineered mutation (76)
  • Chain 'B':
    Compound: Protein FAM105B
    Species: Homo sapiens [TaxId:9606]
    Gene: FAM105B
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q96BN8
      • engineered mutation (76)
  • Chain 'C':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Gene: UBC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4kskc_
  • Chain 'D':
    Compound: Polyubiquitin-C
    Species: Homo sapiens [TaxId:9606]
    Gene: UBC
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d4kskd_
  • Heterogens: SO4, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4kskC (C:)
gamgmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtl
sdyniqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >4kskC (C:)
gmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlr

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4kskD (D:)
gamgmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtl
sdyniqkestlhlvlrlrgg

    Sequence, based on observed residues (ATOM records): (download) 
    >4kskD (D:)
gmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlr