PDB entry 4krl
View 4krl on RCSB PDB site
Description: Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 6.0
Class: transferase/immune system
Keywords: cell surface receptor, glycoprotein, nanobody, VHH domain, Camelid VH domain, antibody, antigen, antibody complex, TRANSFERASE-IMMUNE SYSTEM complex
Deposited on
2013-05-16, released
2013-08-28
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-08-28, with a file datestamp of
2013-08-23.
Experiment type: XRAY
Resolution: 2.85 Å
R-factor: 0.215
AEROSPACI score: 0.26
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Epidermal growth factor receptor
Species: Homo sapiens [TaxId:9606]
Gene: EGFR, ERBB, ERBB1, HER1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4krla1, d4krla2 - Chain 'B':
Compound: Nanobody/VHH domain 7D12
Species: LAMA GLAMA [TaxId:9844]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4krlb_ - Heterogens: MES, NAG, IOD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4krlA (A:)
leekkvcngigigefkdslsinatnikhfknctsisgdlhilpvafrgdsfthtppldpq
eldilktvkeitgflliqawpenrtdlhafenleiirgrtkqhgqfslavvslnitslgl
rslkeisdgdviisgnknlcyantinwkklfgtsgqktkiisnrgensckatgqvchalc
spegcwgpeprdcvscrnvsrgrecvdkhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4krlA (A:)
leekkvcngigigefkdslsinatnikhfknctsisgdlhilpvafrgdsfthtppldpq
eldilktvkeitgflliqawpenrtdlhafenleiirgrtkqhgqfslavvslnitslgl
rslkeisdgdviisgnknlcyantinwkklfgtsgqktkiisnrgensckatgqvchalc
spegcwgpeprdcvscrnvsrgrec
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4krlB (B:)
qvkleesgggsvqtggslrltcaasgrtsrsygmgwfrqapgkerefvsgiswrgdstgy
adsvkgrftisrdnakntvdlqmnslkpedtaiyycaaaagsawygtlyeydywgqgtqv
tvssalehhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4krlB (B:)
qvkleesgggsvqtggslrltcaasgrtsrsygmgwfrqapgkerefvsgiswrgdstgy
adsvkgrftisrdnakntvdlqmnslkpedtaiyycaaaagsawygtlyeydywgqgtqv
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