PDB entry 4kps
View 4kps on RCSB PDB site
Description: Structure and receptor binding specificity of the hemagglutinin H13 from avian influenza A virus H13N6
Class: viral protein
Keywords: receptor binding, VIRAL PROTEIN
Deposited on
2013-05-14, released
2013-07-03
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-08-14, with a file datestamp of
2013-08-09.
Experiment type: XRAY
Resolution: 2.59 Å
R-factor: 0.218
AEROSPACI score: 0.29
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:384499]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4kpsa_ - Chain 'B':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:384499]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4kpsb_ - Chain 'C':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:384499]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4kpsc_ - Chain 'D':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:384499]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4kpsd_ - Chain 'E':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:384499]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4kpse_ - Chain 'F':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:384499]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4kpsf_ - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4kpsA (A:)
iqdricvgylstnsservdtllengvpvtssidlietnhtgtycslngvspvhlgdcsfe
gwivgnpactsnfgirewsyliedpaaphglcypgelnnngelrhlfsgirsfsrtelip
ptswgevldgttsacrdntgtnsfyrnlvwfikknnrypvisktynnttgrdvlvlwgih
hpvsvdetktlyvnsdpytlvstkswsekykletgvrpgyngqrswmkiywslihpgemi
tfesnggflaprygyiieeygkgrifqsrirmsrcntkcqtsvggintnrtfqnidknal
gdcpkyiksgqlklatglrnvpai
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4kpsB (B:)
lfgaiagfieggwpglingwygfqhqneqgtgiaadkestqkaidqittkinniidkmng
nydsirgefnqvekrinmladriddavtdiwsynakllvllendktldmhdanvknlheq
vrrelkdnaidegngcfellhkcndscmetirngtydhteyaees
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>4kpsC (C:)
iqdricvgylstnsservdtllengvpvtssidlietnhtgtycslngvspvhlgdcsfe
gwivgnpactsnfgirewsyliedpaaphglcypgelnnngelrhlfsgirsfsrtelip
ptswgevldgttsacrdntgtnsfyrnlvwfikknnrypvisktynnttgrdvlvlwgih
hpvsvdetktlyvnsdpytlvstkswsekykletgvrpgyngqrswmkiywslihpgemi
tfesnggflaprygyiieeygkgrifqsrirmsrcntkcqtsvggintnrtfqnidknal
gdcpkyiksgqlklatglrnvpai
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>4kpsD (D:)
lfgaiagfieggwpglingwygfqhqneqgtgiaadkestqkaidqittkinniidkmng
nydsirgefnqvekrinmladriddavtdiwsynakllvllendktldmhdanvknlheq
vrrelkdnaidegngcfellhkcndscmetirngtydhteyaees
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>4kpsE (E:)
iqdricvgylstnsservdtllengvpvtssidlietnhtgtycslngvspvhlgdcsfe
gwivgnpactsnfgirewsyliedpaaphglcypgelnnngelrhlfsgirsfsrtelip
ptswgevldgttsacrdntgtnsfyrnlvwfikknnrypvisktynnttgrdvlvlwgih
hpvsvdetktlyvnsdpytlvstkswsekykletgvrpgyngqrswmkiywslihpgemi
tfesnggflaprygyiieeygkgrifqsrirmsrcntkcqtsvggintnrtfqnidknal
gdcpkyiksgqlklatglrnvpai
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>4kpsF (F:)
lfgaiagfieggwpglingwygfqhqneqgtgiaadkestqkaidqittkinniidkmng
nydsirgefnqvekrinmladriddavtdiwsynakllvllendktldmhdanvknlheq
vrrelkdnaidegngcfellhkcndscmetirngtydhteyaees