PDB entry 4kg4

View 4kg4 on RCSB PDB site
Description: Crystal structure of Saccharomyces cerevisiae Dcp2 Nudix domain (E198Q mutation)
Class: hydrolase
Keywords: Nudix, mRNA decay, mRNA decapping, Hydrolase
Deposited on 2013-04-28, released 2013-08-21
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-11-15, with a file datestamp of 2017-11-10.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: N/A
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: mRNA-decapping enzyme subunit 2
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: DCP2, N1917, PSU1, YNL118C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53550
      • engineered mutation (98)
    Domains in SCOPe 2.08: d4kg4a_
  • Chain 'B':
    Compound: mRNA-decapping enzyme subunit 2
    Species: Saccharomyces cerevisiae [TaxId:559292]
    Gene: DCP2, N1917, PSU1, YNL118C
    Database cross-references and differences (RAF-indexed):
    • Uniprot P53550
      • engineered mutation (98)
    Domains in SCOPe 2.08: d4kg4b_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4kg4A (A:)
kksipvrgaaifnenlskillvqgtesdswsfprgkiskdendidccirevkeeigfdlt
dyiddnqfierniqgknykiflisgvsevfnfkpqvrnqidkiewfdfkkisktmyksni
kyylinsmmrplsmwlrhqrqikned

    Sequence, based on observed residues (ATOM records): (download) 
    >4kg4A (A:)
ipvrgaaifnenlskillvqgtesdswsfprgkiskdendidccirevkeeigfdltdyi
ddnqfierniqgknykiflisgvsevfnfkpqvrnqidkiewfdfkkisktmnikyylin
smmrplsmwlrhqrqikn

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4kg4B (B:)
kksipvrgaaifnenlskillvqgtesdswsfprgkiskdendidccirevkeeigfdlt
dyiddnqfierniqgknykiflisgvsevfnfkpqvrnqidkiewfdfkkisktmyksni
kyylinsmmrplsmwlrhqrqikned

    Sequence, based on observed residues (ATOM records): (download) 
    >4kg4B (B:)
ksipvrgaaifnenlskillvqgtesdswsfprgkiskdendidccirevkeeigfdltd
yiddnqfierniqgknykiflisgvsevfnfkpqvrnqidkiewfdfkkisktmyksnik
yylinsmmrplsmwlrhqrqi