PDB entry 4k63
View 4k63 on RCSB PDB site
Description: Structure of an avian influenza H5 hemagglutinin from the influenza virus complexed with avian receptor analog LSTa
Class: viral protein
Keywords: virus attachment, membrane fusion, VIRAL PROTEIN
Deposited on
2013-04-15, released
2013-05-22
The last revision prior to the SCOPe 2.05 freeze date was dated
2013-05-22, with a file datestamp of
2013-05-17.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.248
AEROSPACI score: 0.19
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63a_ - Chain 'B':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63b_ - Chain 'C':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63c_ - Chain 'D':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63d_ - Chain 'E':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63e_ - Chain 'F':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63f_ - Chain 'G':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63g_ - Chain 'H':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:400788]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k63h_ - Heterogens: NAG
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63A (A:)
qdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
wllgnpmcdefinvpewsyivekanptndlcypgsfndyeelkhllsrinhfekiqiipk
sswsdheassgvssacpylgspsffrnvvwlikknstyptikksynntnqedllvlwgih
hpndaaeqtrlyqnpttyisigtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
nfesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihplti
gecpkyvksnrlvlatglrns
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63B (B:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesirngtynypqyse
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63C (C:)
qdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
wllgnpmcdefinvpewsyivekanptndlcypgsfndyeelkhllsrinhfekiqiipk
sswsdheassgvssacpylgspsffrnvvwlikknstyptikksynntnqedllvlwgih
hpndaaeqtrlyqnpttyisigtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
nfesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihplti
gecpkyvksnrlvlatglrns
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63D (D:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesirngtynypqyse
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63E (E:)
qdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
wllgnpmcdefinvpewsyivekanptndlcypgsfndyeelkhllsrinhfekiqiipk
sswsdheassgvssacpylgspsffrnvvwlikknstyptikksynntnqedllvlwgih
hpndaaeqtrlyqnpttyisigtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
nfesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihplti
gecpkyvksnrlvlatglrns
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63F (F:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesirngtynypqyse
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63G (G:)
qdqicigyhannsteqvdtimeknvtvthaqdilekthngklcdldgvkplilrdcsvag
wllgnpmcdefinvpewsyivekanptndlcypgsfndyeelkhllsrinhfekiqiipk
sswsdheassgvssacpylgspsffrnvvwlikknstyptikksynntnqedllvlwgih
hpndaaeqtrlyqnpttyisigtstlnqrlvpkiatrskvngqsgrmeffwtilkpndai
nfesngnfiapeyaykivkkgdsaimkseleygncntkcqtpmgainssmpfhnihplti
gecpkyvksnrlvlatglrns
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>4k63H (H:)
glfgaiagfieggwqgmvdgwygyhhsneqgsgyaadkestqkaidgvtnkvnsiidkmn
tqfeavgrefnnlerrienlnkkmedgfldvwtynaellvlmenertldfhdsnvknlyd
kvrlqlrdnakelgngcfefyhkcdnecmesirngtynypqyse