PDB entry 4k3h
View 4k3h on RCSB PDB site
Description: Immunoglobulin lambda variable domain L5(L89S) fluorogen activationg protein in complex with malachite green
Class: immune system/inhibitor
Keywords: immunoglobulin fold, fluorescensce, malachite green, o-mannosylation, Thr27, immune system-inhibitor complex
Deposited on
2013-04-10, released
2013-10-09
The last revision prior to the SCOPe 2.05 freeze date was dated
2013-11-13, with a file datestamp of
2013-11-08.
Experiment type: XRAY
Resolution: 2.45 Å
R-factor: 0.196
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3ha_ - Chain 'B':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3hb_ - Chain 'C':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3hc_ - Chain 'D':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3hd_ - Chain 'E':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3he_ - Chain 'F':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3hf_ - Chain 'G':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3hg_ - Chain 'H':
Compound: Immunoglobulin lambda variable domain L5(L89S)
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d4k3hh_ - Heterogens: 1OM, GOL, MAN, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4k3hA (A:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hA (A:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'B':
Sequence, based on SEQRES records: (download)
>4k3hB (B:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hB (B:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4k3hC (C:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hC (C:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4k3hD (D:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hD (D:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4k3hE (E:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hE (E:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'F':
Sequence, based on SEQRES records: (download)
>4k3hF (F:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hF (F:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'G':
Sequence, based on SEQRES records: (download)
>4k3hG (G:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hG (G:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl
- Chain 'H':
Sequence, based on SEQRES records: (download)
>4k3hH (H:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvlstghhhhhh
Sequence, based on observed residues (ATOM records): (download)
>4k3hH (H:)
qavvtqepsvtvspggtviltcgsstgavtsghyanwfqqkpgqapralifetdkkyswt
pgrfsgsllgakaaltisdaqpedeaeyycslsdvdgylfgggtqltvl