PDB entry 4juh
View 4juh on RCSB PDB site
Description: Crystal structure of 1918 pandemic influenza virus hemagglutinin mutant D225G complexed with avian receptor analogue LSTa
Class: viral protein
Keywords: virus attachment, membrane fusion, VIRAL PROTEIN
Deposited on
2013-03-24, released
2013-05-01
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-08-07, with a file datestamp of
2013-08-02.
Experiment type: XRAY
Resolution: 2.81 Å
R-factor: 0.204
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:59375]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WFX3 (0-321)
- engineered mutation (221)
- expression tag (322-323)
Domains in SCOPe 2.06: d4juha1, d4juha2 - Chain 'B':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:59375]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4juhb_ - Chain 'C':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:59375]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WFX3 (0-321)
- engineered mutation (221)
- expression tag (322-323)
Domains in SCOPe 2.06: d4juhc1, d4juhc2 - Chain 'D':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:59375]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4juhd_ - Chain 'E':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:59375]
Gene: HA
Database cross-references and differences (RAF-indexed):
- Uniprot Q9WFX3 (0-321)
- engineered mutation (221)
- expression tag (322-323)
Domains in SCOPe 2.06: d4juhe1, d4juhe2 - Chain 'F':
Compound: Hemagglutinin
Species: Influenza A virus [TaxId:59375]
Gene: HA
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4juhf_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>4juhA (A:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrgqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipar
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>4juhB (B:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyseesklnr
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>4juhC (C:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrgqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipar
- Chain 'D':
Sequence, based on SEQRES records: (download)
>4juhD (D:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyseesklnr
Sequence, based on observed residues (ATOM records): (download)
>4juhD (D:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyse
- Chain 'E':
Sequence; same for both SEQRES and ATOM records: (download)
>4juhE (E:)
dticigyhannstdtvdtvleknvtvthsvnlledshngklcklkgiaplqlgkcniagw
llgnpecdllltasswsyivetsnsengtcypgdfidyeelreqlssvssfekfeifpkt
sswpnhettkgvtaacsyagassfyrnllwltkkgssypklsksyvnnkgkevlvlwgvh
hpptgtdqqslyqnadayvsvgsskynrrftpeiaarpkvrgqagrmnyywtllepgdti
tfeatgnliapwyafalnrgsgsgiitsdapvhdcntkcqtphgainsslpfqnihpvti
gecpkyvrstklrmatglrnipar
- Chain 'F':
Sequence, based on SEQRES records: (download)
>4juhF (F:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkyseesklnr
Sequence, based on observed residues (ATOM records): (download)
>4juhF (F:)
glfgaiagfieggwtgmidgwygyhhqneqgsgyaadqkstqnaidgitnkvnsviekmn
tqftavgkefnnlerrienlnkkvddgfldiwtynaellvllenertldfhdsnvrnlye
kvksqlknnakeigngcfefyhkcddacmesvrngtydypkysee