PDB entry 4jri

View 4jri on RCSB PDB site
Description: Crystal Structure of Escherichia coli Hfq Proximal Edge Mutant
Class: RNA binding protein
Keywords: Riboregulator, Post-transcriptional regulator, RNA BINDING PROTEIN
Deposited on 2013-03-21, released 2013-12-11
The last revision prior to the SCOPe 2.08 freeze date was dated 2014-03-12, with a file datestamp of 2014-03-07.
Experiment type: XRAY
Resolution: 1.83 Å
R-factor: 0.208
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: hfq, b4172, JW4130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6X3
      • engineered mutation (37)
    Domains in SCOPe 2.08: d4jria_
  • Chain 'B':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: hfq, b4172, JW4130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6X3
      • engineered mutation (37)
    Domains in SCOPe 2.08: d4jrib_
  • Chain 'C':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: hfq, b4172, JW4130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6X3
      • engineered mutation (37)
    Domains in SCOPe 2.08: d4jric_
  • Chain 'D':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:83333]
    Gene: hfq, b4172, JW4130
    Database cross-references and differences (RAF-indexed):
    • Uniprot P0A6X3
      • engineered mutation (37)
    Domains in SCOPe 2.08: d4jrid_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4jriA (A:)
akgqslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jriA (A:)
slqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4jriB (B:)
akgqslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jriB (B:)
qslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaistvvp
srpv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4jriC (C:)
akgqslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jriC (C:)
qslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaistvvp
srpv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >4jriD (D:)
akgqslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaist
vvpsrpvs

    Sequence, based on observed residues (ATOM records): (download) 
    >4jriD (D:)
qslqdpflnalrrervpvsiylvngiklqgqieswdqfvillkntvsqmvykhaistvvp
srpv