PDB entry 4j1u
View 4j1u on RCSB PDB site
Description: Crystal structure of antibody 93F3 unstable variant
Class: immune system
Keywords: antibody maturation, antibody stability, clonal selection, IMMUNE SYSTEM
Deposited on
2013-02-02, released
2013-03-13
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-05-22, with a file datestamp of
2013-05-17.
Experiment type: XRAY
Resolution: 2.58 Å
R-factor: 0.213
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: antibody 93F3 Light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4j1ua1, d4j1ua2 - Chain 'B':
Compound: antibody 93F3 Heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: antibody 93F3 Light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4j1uc1, d4j1uc2 - Chain 'D':
Compound: antibody 93F3 Heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: antibody 93F3 Light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d4j1ue1, d4j1ue2 - Chain 'F':
Compound: antibody 93F3 Heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4j1uA (A:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqsptkliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsydlptfgagtklelkrsvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>4j1uA (A:)
divmsqspsslavsagekvtmsckssqsllnknylawyqqkpgqsptkliywastresgv
pdrftgsgsgtdftltissvqaedlavyyckqsydlptfgagtklelkrsvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksf
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence, based on SEQRES records: (download)
>4j1uC (C:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqsptkliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsydlptfgagtklelkrsvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>4j1uC (C:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqsptkliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsydlptfgagtklelkrsvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhacevthqglsspvtksfnr
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>4j1uE (E:)
divmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqsptkliywastr
esgvpdrftgsgsgtdftltissvqaedlavyyckqsydlptfgagtklelkrsvaapsv
fifppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstysl
sstltlskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>4j1uE (E:)
vmsqspsslavsagekvtmsckssqsllnsrtrknylawyqqkpgqsptkliywastres
gvpdrftgsgsgtdftltissvqaedlavyyckqsydlptfgagtklelkrsvaapsvfi
fppsdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslss
tltlskadyekhkvyacevthqglsspvtksfnr
- Chain 'F':
No sequence available.