PDB entry 4i6j

View 4i6j on RCSB PDB site
Description: A ubiquitin ligase-substrate complex
Class: transcription
Keywords: Circadian Clock, Ubiquitination, LRR, F-box, Photolyase fold, Periods, Nucleus, TRANSCRIPTION
Deposited on 2012-11-29, released 2013-03-13
The last revision prior to the SCOPe 2.07 freeze date was dated 2013-05-01, with a file datestamp of 2013-04-26.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.206
AEROSPACI score: 0.24 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Cryptochrome-2
    Species: Mus musculus [TaxId:10090]
    Gene: Cry2, Kiaa0658
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4i6ja1
  • Chain 'B':
    Compound: F-box/LRR-repeat protein 3
    Species: Homo sapiens [TaxId:9606]
    Gene: FBXL3, FBL3A, FBXL3A
    Database cross-references and differences (RAF-indexed):
  • Chain 'C':
    Compound: S-phase kinase-associated protein 1
    Species: Homo sapiens [TaxId:9606]
    Gene: SKP1, EMC19, OCP2, SKP1A, TCEB1L
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.07: d4i6jc1, d4i6jc2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4i6jA (A:)
maaaavvaatvpaqsmgadgassvhwfrkglrlhdnpallaavrgarcvrcvyildpwfa
asssvginrwrfllqsledldtslrklnsrlfvvrgqpadvfprlfkewgvtrltfeyds
epfgkerdaaimkmakeagvevvtenshtlydldriielngqkppltykrfqalisrmel
pkkpavavssqqmescraeiqenhddtygvpsleelgfpteglgpavwqggetealarld
khlerkawvanyerprmnansllasptglspylrfgclscrlfyyrlwdlykkvkrnstp
plslfgqllwreffytaatnnprfdrmegnpiciqipwdrnpealakwaegktgfpwida
imtqlrqegwihhlarhavacfltrgdlwvswesgvrvfdellldadfsvnagswmwlsc
saffqqffhcycpvgfgrrtdpsgdyirrylpklkgfpsryiyepwnapesvqkaakcii
gvdyprpivnhaetsrlniermkqiyqqlsryrglcllasvpscvedlshpvaepgssqa
gsis

    Sequence, based on observed residues (ATOM records): (download) 
    >4i6jA (A:)
assvhwfrkglrlhdnpallaavrgarcvrcvyildpwfaasssvginrwrfllqsledl
dtslrklnsrlfvvrgqpadvfprlfkewgvtrltfeydsepfgkerdaaimkmakeagv
evvtenshtlydldriielngqkppltykrfqalisrmelpkkpavavssqqmescraei
qenhddtygvpsleelgfpteglgpavwqggetealarldkhlerkawvanrmnanslla
sptglspylrfgclscrlfyyrlwdlykkvkrnstpplslfgqllwreffytaatnnprf
drmegnpiciqipwdrnpealakwaegktgfpwidaimtqlrqegwihhlarhavacflt
rgdlwvswesgvrvfdellldadfsvnagswmwlscsaffqqffhcycpvgfgrrtdpsg
dyirrylpklkgfpsryiyepwnapesvqkaakciigvdyprpivnhaetsrlniermkq
iyqqlsryrglcllasvpscved

  • Chain 'B':
    No sequence available.

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >4i6jC (C:)
mpsiklqssdgeifevdveiakqsvtiktmledlgmddegdddpvplpnvnaailkkviq
wcthhkddppppeddenkekrtddipvwdqeflkvdqgtlfelilaanyldikglldvtc
ktvanmikgktpeeirktfnikndfteeeeaqvrkenqwceek

    Sequence, based on observed residues (ATOM records): (download) 
    >4i6jC (C:)
siklqssdgeifevdveiakqsvtiktmledpvplpnvnaailkkviqwcthipvwdqef
lkvdqgtlfelilaanyldikglldvtcktvanmikgktpeeirktfnikndfteeeeaq
vrkenqwcee