PDB entry 4i27
View 4i27 on RCSB PDB site
Description: Ternary complex of mouse TdT with ssDNA and incoming nucleotide
Class: transferase/DNA
Keywords: Terminal transferase, TRANSFERASE-DNA complex
Deposited on
2012-11-21, released
2013-07-24
The last revision prior to the SCOPe 2.04 freeze date was dated
2013-11-13, with a file datestamp of
2013-11-08.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.174
AEROSPACI score: 0.27
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA nucleotidylexotransferase
Species: Mus musculus [TaxId:10090]
Gene: DNTT, TDT
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d4i27a1, d4i27a2, d4i27a3 - Chain 'C':
Compound: 5'-d(*ap*ap*ap*ap*ap*t)-3'
- Heterogens: MG, D3T, NA, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>4i27A (A:)
mgsshhhhhhssglvprgshmspspvpgsqnvpapavkkisqyacqrrttlnnynqlftd
aldilaendelrenegsclafmrassvlkslpfpitsmkdtegipclgdkvksiiegiie
dgesseakavlnderyksfklftsvfgvglktaekwfrmgfrtlskiqsdkslrftqmqk
agflyyedlvscvnrpeaeavsmlvkeavvtflpdalvtmtggfrrgkmtghdvdflits
peatedeeqqllhkvtdfwkqqglllycdilestfekfkqpsrkvdaldhfqkcflilkl
dhgrvhseksgqqegkgwkairvdlvmcpydrrafallgwtgsrqferdlrryatherkm
mldnhalydrtkrvfleaeseeeifahlgldyiepwerna
Sequence, based on observed residues (ATOM records): (download)
>4i27A (A:)
avkkisqyacqrrttlnnynqlftdaldilaendelrenegsclafmrassvlkslpfpi
tsmkdtegipclgdkvksiiegiiedgesseakavlnderyksfklftsvfgvglktaek
wfrmgfrtlskiqsdkslrftqmqkagflyyedlvscvnrpeaeavsmlvkeavvtflpd
alvtmtggfrrgkmtghdvdflitspeatedeeqqllhkvtdfwkqqglllycdilestf
ekfkqpsaldhfqkcflilkldhgrvhseksgqqegkgwkairvdlvmcpydrrafallg
wtgsrqferdlrryatherkmmldnhalydrtkrvfleaeseeeifahlgldyiepwern
a
- Chain 'C':
No sequence available.