PDB entry 4hp8

View 4hp8 on RCSB PDB site
Description: Crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase from Agrobacterium Tumefaciens (target EFI-506435) with bound NADP
Class: oxidoreductase
Keywords: enzyme function initiative, EFI, Structural Genomics, OXIDOREDUCTASE
Deposited on 2012-10-23, released 2012-11-07
The last revision prior to the SCOPe 2.08 freeze date was dated 2012-11-07, with a file datestamp of 2012-11-02.
Experiment type: XRAY
Resolution: 1.35 Å
R-factor: 0.14
AEROSPACI score: 0.75 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: 2-deoxy-D-gluconate 3-dehydrogenase
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: kduD, Atu3141
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4hp8a_
  • Chain 'B':
    Compound: 2-deoxy-D-gluconate 3-dehydrogenase
    Species: Agrobacterium tumefaciens [TaxId:176299]
    Gene: kduD, Atu3141
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d4hp8b_
  • Heterogens: NAP, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >4hp8A (A:)
mknpfslegrkalvtgantglgqaiavglaaagaevvcaarrapdetldiiakdggnasa
llidfadplaakdsftdagfdilvnnagiirradsvefseldwdevmdvnlkalffttqa
fakellakgrsgkvvniasllsfqggirvpsytaakhgvagltkllanewaakginvnai
apgyietnntealradaarnkaileripagrwghsediagaavflssaaadyvhgailnv
dggwlar

    Sequence, based on observed residues (ATOM records): (download) 
    >4hp8A (A:)
npfslegrkalvtgantglgqaiavglaaagaevvcaarrapdetldiiakdggnasall
idfadplaakdsftdagfdilvnnagiirradsvefseldwdevmdvnlkalffttqafa
kellakgrsgkvvniasllsfqggirvpsytaakhgvagltkllanewaakginvnaiap
gyietnntealradaarnkaileripagrwghsediagaavflssaaadyvhgailnvdg
gwlar

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >4hp8B (B:)
mknpfslegrkalvtgantglgqaiavglaaagaevvcaarrapdetldiiakdggnasa
llidfadplaakdsftdagfdilvnnagiirradsvefseldwdevmdvnlkalffttqa
fakellakgrsgkvvniasllsfqggirvpsytaakhgvagltkllanewaakginvnai
apgyietnntealradaarnkaileripagrwghsediagaavflssaaadyvhgailnv
dggwlar

    Sequence, based on observed residues (ATOM records): (download) 
    >4hp8B (B:)
knpfslegrkalvtgantglgqaiavglaaagaevvcaarrapdetldiiakdggnasal
lidfadplaakdsftdagfdilvnnagiirradsvefseldwdevmdvnlkalffttqaf
akellakgrsgkvvniasllsfqggirvpsytaakhgvagltkllanewaakginvnaia
pgyietnntealradaarnkaileripagrwghsediagaavflssaaadyvhgailnvd
ggwlar